Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31080

Experiment: Cytidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytidine (N)
3,247,834	-		PGA1_c31070	0.88	+0.3
3,247,901	-				+0.9
3,247,955	+				+2.0
3,247,991	+				-0.1
3,247,999	-				-0.3
3,247,999	-				-0.0
3,248,036	-		PGA1_c31075	0.10	-0.1
3,248,036	-		PGA1_c31075	0.10	+1.5
3,248,036	-		PGA1_c31075	0.10	-0.6
3,248,084	-		PGA1_c31075	0.23	-0.6
3,248,097	+		PGA1_c31075	0.27	+0.2
3,248,097	+		PGA1_c31075	0.27	-0.4
3,248,097	+		PGA1_c31075	0.27	-0.5
3,248,105	-		PGA1_c31075	0.29	-0.3
3,248,107	+		PGA1_c31075	0.29	+0.8
3,248,109	-		PGA1_c31075	0.30	+0.3
3,248,120	-		PGA1_c31075	0.33	+0.4
3,248,147	+		PGA1_c31075	0.40	+0.1
3,248,147	+		PGA1_c31075	0.40	-0.1
3,248,147	+		PGA1_c31075	0.40	+0.2
3,248,147	+		PGA1_c31075	0.40	-0.4
3,248,147	+		PGA1_c31075	0.40	-0.3
3,248,147	+		PGA1_c31075	0.40	+0.2
3,248,147	+		PGA1_c31075	0.40	+0.5
3,248,148	+		PGA1_c31075	0.40	-1.0
3,248,155	-		PGA1_c31075	0.42	+2.2
3,248,155	-		PGA1_c31075	0.42	-0.3
3,248,155	-		PGA1_c31075	0.42	+0.2
3,248,155	-		PGA1_c31075	0.42	-1.0
3,248,155	-		PGA1_c31075	0.42	+0.5
3,248,155	-		PGA1_c31075	0.42	+0.9
3,248,155	-		PGA1_c31075	0.42	-0.7
3,248,160	-		PGA1_c31075	0.43	+0.6
3,248,165	-		PGA1_c31075	0.45	-1.1
3,248,167	-		PGA1_c31075	0.45	+0.7
3,248,191	+		PGA1_c31075	0.52	+0.2
3,248,196	+		PGA1_c31075	0.53	+0.8
3,248,196	+		PGA1_c31075	0.53	-0.3
3,248,196	+		PGA1_c31075	0.53	+0.9
3,248,196	+		PGA1_c31075	0.53	+0.2
3,248,196	+		PGA1_c31075	0.53	+0.2
3,248,196	+		PGA1_c31075	0.53	+0.4
3,248,196	+		PGA1_c31075	0.53	-0.5
3,248,196	+		PGA1_c31075	0.53	-0.1
3,248,196	+		PGA1_c31075	0.53	+1.4
3,248,196	+		PGA1_c31075	0.53	+0.3
3,248,196	+		PGA1_c31075	0.53	-0.0
3,248,196	+		PGA1_c31075	0.53	+0.5
3,248,196	+		PGA1_c31075	0.53	+0.5
3,248,196	+		PGA1_c31075	0.53	-0.4
3,248,196	+		PGA1_c31075	0.53	-0.1
3,248,204	-		PGA1_c31075	0.55	-0.2
3,248,204	-		PGA1_c31075	0.55	+2.7
3,248,204	-		PGA1_c31075	0.55	-1.7
3,248,204	-		PGA1_c31075	0.55	+0.2
3,248,204	-		PGA1_c31075	0.55	-1.4
3,248,204	-		PGA1_c31075	0.55	+1.2
3,248,204	-		PGA1_c31075	0.55	-1.1
3,248,204	-		PGA1_c31075	0.55	-0.2
3,248,204	-		PGA1_c31075	0.55	+2.0
3,248,204	-		PGA1_c31075	0.55	-0.1
3,248,204	-		PGA1_c31075	0.55	-0.5
3,248,204	-		PGA1_c31075	0.55	+0.4
3,248,204	-		PGA1_c31075	0.55	-1.3
3,248,204	-		PGA1_c31075	0.55	+0.6
3,248,204	-		PGA1_c31075	0.55	+0.5
3,248,204	-		PGA1_c31075	0.55	+0.2
3,248,204	-		PGA1_c31075	0.55	+0.4
3,248,204	-		PGA1_c31075	0.55	-2.5
3,248,247	+		PGA1_c31075	0.67	-0.4
3,248,249	+		PGA1_c31075	0.67	-0.1
3,248,253	-		PGA1_c31075	0.68	+0.3
3,248,253	-		PGA1_c31075	0.68	+0.2
3,248,253	-		PGA1_c31075	0.68	-0.6
3,248,258	-		PGA1_c31075	0.70	+0.3
3,248,258	-		PGA1_c31075	0.70	+0.1
3,248,291	+		PGA1_c31075	0.78	-0.3
3,248,293	+		PGA1_c31075	0.79	-0.2
3,248,323	+		PGA1_c31075	0.87	-0.2
3,248,323	+		PGA1_c31075	0.87	+2.0
3,248,323	+		PGA1_c31075	0.87	-0.6
3,248,323	+		PGA1_c31075	0.87	-0.5
3,248,325	+		PGA1_c31075	0.87	-1.5
3,248,331	+		PGA1_c31075	0.89	-0.1
3,248,331	-		PGA1_c31075	0.89	+0.8
3,248,333	+		PGA1_c31075	0.90	-1.3
3,248,349	-				+0.0
3,248,366	+				-0.1
3,248,377	+				-0.5
3,248,383	-				-0.5
3,248,420	+				+0.2
3,248,420	+				+0.2
3,248,420	+				+1.5
3,248,420	+				+1.0
3,248,428	-				-0.4
3,248,428	-				+0.6
3,248,428	-				+0.5
3,248,428	-				-1.2
3,248,428	-				-0.3
3,248,430	+				+0.1
3,248,430	+				-0.1
3,248,430	+				-0.3
3,248,430	+				-1.0
3,248,438	-				-0.3
3,248,438	-				-1.8
3,248,438	-				+0.6
3,248,438	-				-0.1
3,248,443	-				+0.2
3,248,445	+				+0.3
3,248,451	-				-0.4
3,248,451	-				-0.9
3,248,463	-				-2.8
3,248,549	+				+1.3
3,248,549	+				+0.6
3,248,549	+				-0.2
3,248,557	-				+1.1
3,248,557	-				-1.0
3,248,557	-				-0.5
3,248,557	-				-0.5
3,248,557	-				+1.1
3,248,557	-				+0.1
3,248,591	+				+0.5
3,248,591	+				+0.5
3,248,591	+				+0.2
3,248,591	+				-0.5
3,248,599	+				-0.5
3,248,599	-				-0.4
3,248,599	-				-0.7
3,248,601	+				-0.6
3,248,607	+				-1.2
3,248,607	-				+0.2
3,248,609	-				-0.7
3,248,646	+				+1.5
3,248,654	-				-0.5
3,248,654	-				-0.9
3,248,654	-				-0.0
3,248,654	-				+0.6
3,248,673	+				+1.0
3,248,680	-				+0.2
3,248,705	+				-0.7
3,248,705	+				-0.5
3,248,705	+				+0.9
3,248,705	+				-0.9
3,248,711	+				+0.5
3,248,711	+				-0.8
3,248,711	-				-0.1
3,248,719	-				-0.5
3,248,721	+				-0.4
3,248,735	+				+0.9
3,248,740	+				+1.6
3,248,741	-				-0.0
3,248,743	-				-0.6
3,248,745	+				+0.6
3,248,753	-				-0.1
3,248,755	+				-0.4
3,248,755	+				-0.0
3,248,755	+				-0.5
3,248,763	-				-1.7
3,248,763	-				-0.1
3,248,763	-				-0.2
3,248,791	+				+0.6
3,248,791	+				-0.0
3,248,791	+				+0.3
3,248,793	+				+0.4
3,248,799	+				+0.1
3,248,799	-				-1.6
3,248,799	-				+0.4
3,248,799	-				-0.7
3,248,799	-				-0.5
3,248,799	-				-0.8
3,248,801	-				-0.3
3,248,801	-				-1.1
3,248,825	+				-0.0
3,248,832	+				+0.5
3,248,835	-		PGA1_c31080	0.10	-0.1
3,248,840	-		PGA1_c31080	0.11	+0.7
3,248,840	-		PGA1_c31080	0.11	-0.0
3,248,840	-		PGA1_c31080	0.11	-1.3
3,248,844	+		PGA1_c31080	0.12	+0.4
3,248,844	+		PGA1_c31080	0.12	+0.8
3,248,852	-		PGA1_c31080	0.13	+1.1
3,248,852	-		PGA1_c31080	0.13	-0.1
3,248,875	-		PGA1_c31080	0.16	-0.1
3,248,875	-		PGA1_c31080	0.16	-0.5
3,248,894	+		PGA1_c31080	0.19	+0.5
3,248,924	+		PGA1_c31080	0.23	-0.4
3,248,932	-		PGA1_c31080	0.25	-0.6
3,248,934	-		PGA1_c31080	0.25	+0.4
3,248,943	+		PGA1_c31080	0.26	+0.4
3,248,963	+		PGA1_c31080	0.29	-0.5
3,248,997	-		PGA1_c31080	0.34	+1.1
3,248,999	+		PGA1_c31080	0.34	-0.7
3,249,029	+		PGA1_c31080	0.39	+0.2
3,249,030	-		PGA1_c31080	0.39	+0.5
3,249,037	+		PGA1_c31080	0.40	+0.6
3,249,037	+		PGA1_c31080	0.40	+0.7
3,249,037	+		PGA1_c31080	0.40	-0.4
3,249,040	-		PGA1_c31080	0.40	-1.5
3,249,045	-		PGA1_c31080	0.41	+1.1
3,249,052	-		PGA1_c31080	0.42	-0.3
3,249,060	-		PGA1_c31080	0.43	-0.3
3,249,062	+		PGA1_c31080	0.44	-0.6
3,249,062	-		PGA1_c31080	0.44	+0.3
3,249,062	-		PGA1_c31080	0.44	+0.4
3,249,065	-		PGA1_c31080	0.44	+0.9
3,249,070	-		PGA1_c31080	0.45	-1.8
3,249,070	-		PGA1_c31080	0.45	+1.9
3,249,070	-		PGA1_c31080	0.45	+1.1
3,249,096	-		PGA1_c31080	0.49	-1.6
3,249,147	-		PGA1_c31080	0.56	+1.6
3,249,154	+		PGA1_c31080	0.57	-0.6
3,249,174	+		PGA1_c31080	0.60	+0.5
3,249,181	-		PGA1_c31080	0.61	+0.5
3,249,181	-		PGA1_c31080	0.61	+1.5
3,249,181	-		PGA1_c31080	0.61	-0.4
3,249,182	-		PGA1_c31080	0.61	+0.0
3,249,182	-		PGA1_c31080	0.61	+0.3
3,249,194	+		PGA1_c31080	0.63	-0.2
3,249,194	+		PGA1_c31080	0.63	+0.7
3,249,282	-		PGA1_c31080	0.76	+0.5
3,249,282	-		PGA1_c31080	0.76	+0.9
3,249,289	+		PGA1_c31080	0.77	-1.8
3,249,297	-		PGA1_c31080	0.78	-0.4
3,249,307	-		PGA1_c31080	0.79	+1.1
3,249,319	-		PGA1_c31080	0.81	+1.8
3,249,319	-		PGA1_c31080	0.81	-0.8
3,249,344	-		PGA1_c31080	0.85	+0.5
3,249,356	+		PGA1_c31080	0.87	+0.0
3,249,366	+		PGA1_c31080	0.88	+0.8
3,249,374	-		PGA1_c31080	0.89	+1.8
3,249,377	+		PGA1_c31080	0.90	-0.1
3,249,377	+		PGA1_c31080	0.90	-1.7
3,249,377	+		PGA1_c31080	0.90	+1.4
3,249,377	+		PGA1_c31080	0.90	-0.0
3,249,385	+				+0.3
3,249,385	-				+1.3
3,249,385	-				+0.7
3,249,385	-				-0.5
3,249,385	-				-0.3
3,249,395	+				-0.1
3,249,432	-				+0.6
3,249,435	+				+0.5
3,249,437	+				+0.0
3,249,489	+				+2.2
3,249,489	+				-1.8
3,249,490	-				-0.5
3,249,499	+				+0.2
3,249,520	+				-0.3
3,249,537	-				+0.7
3,249,547	+				-0.0
3,249,563	+				-0.5
3,249,563	+				+0.4
3,249,563	+				-0.1
3,249,563	+				-0.3
3,249,564	+				-0.5
3,249,564	+				+0.8
3,249,564	+				-1.6
3,249,564	+				-0.2
3,249,566	-				-0.8
3,249,568	-				-0.5
3,249,568	-				-0.4
3,249,568	-				-1.2
3,249,571	-				-0.8
3,249,571	-				+0.7
3,249,572	-				+0.0
3,249,572	-				+1.1
3,249,572	-				-0.7
3,249,583	+				-0.8
3,249,586	-				+0.2
3,249,591	-				+0.1
3,249,613	-				-0.0
3,249,618	+				+0.4
3,249,621	-				-1.6
3,249,631	-				-0.2
3,249,650	+				-0.0
3,249,661	+				+0.4
3,249,661	+				-0.5
3,249,664	+				+0.6
3,249,666	+				+0.0
3,249,669	-				+0.1
3,249,686	+				+0.2
3,249,694	-				+0.5
3,249,754	+				+0.8
3,249,754	+				-1.3
3,249,754	+				-0.9
3,249,759	+				-0.8
3,249,763	-				+0.4
3,249,766	+				+0.3
3,249,766	+				+0.0
3,249,773	-				+0.6
3,249,776	+				-0.1
3,249,776	+				+0.5
3,249,784	-				+0.3
3,249,846	-				-0.4
3,249,846	-				-0.2
3,249,901	-				+0.3
3,249,916	+				-0.2
3,249,935	+				+0.4
3,249,942	+				+0.6
3,249,943	-				-1.7
3,250,178	-		PGA1_c31100	0.16	-1.3
3,250,234	+		PGA1_c31100	0.46	-1.4
3,250,242	-		PGA1_c31100	0.51	-0.5
3,250,245	-		PGA1_c31100	0.52	-0.0
3,250,264	+		PGA1_c31100	0.63	-0.4
3,250,295	+		PGA1_c31100	0.80	-0.4
3,250,315	-				-0.5
3,250,326	+				-0.0
3,250,334	-				+0.9
3,250,339	-				-0.3
3,250,351	+				+0.5
3,250,384	+				+0.3
3,250,390	+				-0.2
3,250,392	-				+2.0
3,250,416	-				-0.6
3,250,416	-				+0.2