Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2372 and Dshi_2373 are separated by 230 nucleotides Dshi_2373 and Dshi_2374 are separated by 287 nucleotides
Dshi_2372: Dshi_2372 - orotate phosphoribosyltransferase (RefSeq), at 2,504,743 to 2,505,423
_2372
Dshi_2373: Dshi_2373 - replicative DNA helicase (RefSeq), at 2,505,654 to 2,507,174
_2373
Dshi_2374: Dshi_2374 - putative methyl-accepting chemotaxis sensory transducer (RefSeq), at 2,507,462 to 2,508,685
_2374
Position (kb)
2505
2506
2507
2508 Strain fitness (log2 ratio)
-2
-1
0
1 at 2504.693 kb on - strand at 2504.714 kb on - strand at 2504.789 kb on + strand at 2504.797 kb on - strand at 2504.857 kb on + strand, within Dshi_2372 at 2504.870 kb on - strand, within Dshi_2372 at 2504.893 kb on - strand, within Dshi_2372 at 2505.096 kb on + strand, within Dshi_2372 at 2505.104 kb on - strand, within Dshi_2372 at 2505.142 kb on + strand, within Dshi_2372 at 2505.294 kb on + strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372 at 2505.302 kb on - strand, within Dshi_2372 at 2507.318 kb on - strand at 2507.369 kb on + strand at 2507.379 kb on + strand at 2507.404 kb on + strand at 2507.580 kb on - strand at 2507.623 kb on + strand, within Dshi_2374 at 2507.713 kb on - strand, within Dshi_2374 at 2507.748 kb on - strand, within Dshi_2374 at 2507.768 kb on - strand, within Dshi_2374 at 2507.843 kb on - strand, within Dshi_2374 at 2507.906 kb on - strand, within Dshi_2374 at 2508.092 kb on + strand, within Dshi_2374 at 2508.114 kb on + strand, within Dshi_2374
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,504,693 - +1.1 2,504,714 - -1.1 2,504,789 + -1.5 2,504,797 - -0.5 2,504,857 + Dshi_2372 0.17 -1.1 2,504,870 - Dshi_2372 0.19 -2.7 2,504,893 - Dshi_2372 0.22 -2.1 2,505,096 + Dshi_2372 0.52 -1.0 2,505,104 - Dshi_2372 0.53 -0.6 2,505,142 + Dshi_2372 0.59 -1.0 2,505,294 + Dshi_2372 0.81 -1.5 2,505,302 - Dshi_2372 0.82 -1.9 2,505,302 - Dshi_2372 0.82 -1.2 2,507,318 - -0.1 2,507,369 + +1.6 2,507,379 + +1.3 2,507,404 + +1.3 2,507,580 - -0.0 2,507,623 + Dshi_2374 0.13 +0.8 2,507,713 - Dshi_2374 0.21 +0.0 2,507,748 - Dshi_2374 0.23 +0.9 2,507,768 - Dshi_2374 0.25 +0.8 2,507,843 - Dshi_2374 0.31 -0.4 2,507,906 - Dshi_2374 0.36 +0.3 2,508,092 + Dshi_2374 0.51 +1.2 2,508,114 + Dshi_2374 0.53 +0.5
Or see this region's nucleotide sequence