Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1274

Experiment: BG11 with Chlorite 0.3125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chlorite 0.3125 mM
1,297,650	+		Synpcc7942_1273	0.55	+0.9
1,297,650	+		Synpcc7942_1273	0.55	+0.2
1,297,658	-		Synpcc7942_1273	0.55	-0.9
1,297,658	-		Synpcc7942_1273	0.55	-1.1
1,297,658	-		Synpcc7942_1273	0.55	-1.0
1,297,662	+		Synpcc7942_1273	0.55	-1.0
1,297,664	+		Synpcc7942_1273	0.55	+1.1
1,297,761	-		Synpcc7942_1273	0.62	-1.3
1,297,762	-		Synpcc7942_1273	0.62	-1.1
1,297,791	+		Synpcc7942_1273	0.64	-0.4
1,297,791	+		Synpcc7942_1273	0.64	+1.8
1,297,791	+		Synpcc7942_1273	0.64	+1.2
1,297,791	+		Synpcc7942_1273	0.64	+0.9
1,297,791	+		Synpcc7942_1273	0.64	-1.5
1,297,791	+		Synpcc7942_1273	0.64	-0.3
1,297,791	+		Synpcc7942_1273	0.64	+0.8
1,297,791	+		Synpcc7942_1273	0.64	-0.6
1,297,798	+		Synpcc7942_1273	0.64	-1.3
1,297,799	-		Synpcc7942_1273	0.64	-0.5
1,297,799	-		Synpcc7942_1273	0.64	+0.9
1,297,799	-		Synpcc7942_1273	0.64	-1.0
1,297,799	-		Synpcc7942_1273	0.64	+0.0
1,297,799	-		Synpcc7942_1273	0.64	+0.2
1,297,799	-		Synpcc7942_1273	0.64	-0.5
1,297,803	+		Synpcc7942_1273	0.65	-0.5
1,297,826	+		Synpcc7942_1273	0.66	-0.1
1,297,826	+		Synpcc7942_1273	0.66	+0.7
1,297,826	+		Synpcc7942_1273	0.66	+0.1
1,297,826	+		Synpcc7942_1273	0.66	+0.7
1,297,831	+		Synpcc7942_1273	0.66	+0.4
1,297,831	+		Synpcc7942_1273	0.66	-1.2
1,297,834	-		Synpcc7942_1273	0.67	+0.4
1,297,834	-		Synpcc7942_1273	0.67	+0.1
1,297,836	+		Synpcc7942_1273	0.67	+0.5
1,297,848	+		Synpcc7942_1273	0.67	+0.3
1,297,848	+		Synpcc7942_1273	0.67	-0.8
1,297,858	+		Synpcc7942_1273	0.68	+0.1
1,297,864	+		Synpcc7942_1273	0.68	-0.2
1,297,890	+		Synpcc7942_1273	0.70	-0.7
1,297,906	+		Synpcc7942_1273	0.71	-0.1
1,297,911	+		Synpcc7942_1273	0.72	-0.4
1,297,925	+		Synpcc7942_1273	0.72	+0.8
1,297,930	+		Synpcc7942_1273	0.73	-0.2
1,297,930	+		Synpcc7942_1273	0.73	+2.1
1,297,930	+		Synpcc7942_1273	0.73	-1.1
1,297,938	-		Synpcc7942_1273	0.73	+0.2
1,297,938	-		Synpcc7942_1273	0.73	-0.3
1,297,938	-		Synpcc7942_1273	0.73	-0.2
1,297,949	-		Synpcc7942_1273	0.74	+0.0
1,297,958	+		Synpcc7942_1273	0.75	-0.3
1,297,983	-		Synpcc7942_1273	0.76	+0.1
1,297,985	+		Synpcc7942_1273	0.76	-0.2
1,297,985	+		Synpcc7942_1273	0.76	-0.2
1,298,003	-		Synpcc7942_1273	0.78	+0.3
1,298,013	-		Synpcc7942_1273	0.78	-1.1
1,298,028	+		Synpcc7942_1273	0.79	-0.7
1,298,036	-		Synpcc7942_1273	0.80	+0.2
1,298,037	-		Synpcc7942_1273	0.80	-0.9
1,298,052	-		Synpcc7942_1273	0.81	+0.0
1,298,055	+		Synpcc7942_1273	0.81	-0.2
1,298,065	+		Synpcc7942_1273	0.82	+0.2
1,298,092	-		Synpcc7942_1273	0.83	+0.4
1,298,092	-		Synpcc7942_1273	0.83	+0.4
1,298,101	+		Synpcc7942_1273	0.84	-0.5
1,298,133	+		Synpcc7942_1273	0.86	+0.3
1,298,138	+		Synpcc7942_1273	0.86	-0.6
1,298,138	+		Synpcc7942_1273	0.86	+0.5
1,298,141	-		Synpcc7942_1273	0.87	+0.4
1,298,146	-		Synpcc7942_1273	0.87	-1.0
1,298,204	+				-0.0
1,298,223	+				+0.4
1,298,225	+				-0.1
1,298,250	-				-0.8
1,298,250	-				-1.3
1,298,260	-				-0.2
1,298,260	-				-0.3
1,298,340	-				+0.3
1,298,355	+				+0.3
1,298,355	+				+0.5
1,298,355	+				-0.7
1,298,355	+				-0.7
1,298,355	+				-1.2
1,298,355	+				+1.6
1,298,363	-				+0.4
1,298,363	-				+0.1
1,298,363	-				-0.8
1,298,363	-				+0.7
1,298,363	-				-0.7
1,298,363	-				-1.2
1,298,375	+				-0.6
1,298,383	-				+0.3
1,298,403	+				+0.9
1,298,482	-				+0.7
1,298,503	-				+0.6
1,298,503	-				-0.5
1,298,503	-				-0.2
1,298,503	-				+0.2
1,298,543	+				+0.1
1,298,553	-				-0.8
1,298,566	+				-1.0
1,298,593	-				-2.2
1,298,610	+				-1.2
1,298,635	-				+0.1
1,298,635	-				-0.5
1,298,661	-				-1.2
1,298,661	-				-0.1
1,299,223	+				-0.7
1,299,265	-				+0.2
1,299,283	+				-0.2
1,299,291	-				-0.2
1,299,291	-				-0.4
1,299,338	-		Synpcc7942_1275	0.13	+0.7
1,299,353	-		Synpcc7942_1275	0.14	-0.7
1,299,372	+		Synpcc7942_1275	0.16	-0.5
1,299,377	+		Synpcc7942_1275	0.16	-0.2
1,299,380	-		Synpcc7942_1275	0.17	-0.2
1,299,394	+		Synpcc7942_1275	0.18	-0.3
1,299,408	+		Synpcc7942_1275	0.19	-0.0
1,299,468	+		Synpcc7942_1275	0.24	-1.2
1,299,474	+		Synpcc7942_1275	0.25	+0.5
1,299,474	+				+0.8
1,299,474	+		Synpcc7942_1275	0.25	-1.7
1,299,476	-		Synpcc7942_1275	0.25	-1.3
1,299,476	-		Synpcc7942_1275	0.25	+1.1
1,299,536	+		Synpcc7942_1275	0.30	-1.6
1,299,558	-		Synpcc7942_1275	0.32	+0.6
1,299,578	-		Synpcc7942_1275	0.34	+0.1
1,299,603	+		Synpcc7942_1275	0.36	+0.1
1,299,661	+		Synpcc7942_1275	0.41	-1.1
1,299,669	-		Synpcc7942_1275	0.41	-1.0
1,299,678	+		Synpcc7942_1275	0.42	-0.5
1,299,704	-		Synpcc7942_1275	0.44	-0.6
1,299,756	+		Synpcc7942_1275	0.49	+0.1
1,299,764	-		Synpcc7942_1275	0.50	-0.6
1,299,811	+		Synpcc7942_1275	0.54	-0.2
1,299,830	-		Synpcc7942_1275	0.55	-0.8
1,299,844	+		Synpcc7942_1275	0.56	-2.1
1,299,844	+		Synpcc7942_1275	0.56	-0.2
1,299,852	-		Synpcc7942_1275	0.57	+0.3
1,299,875	-		Synpcc7942_1275	0.59	+1.7
1,299,893	+		Synpcc7942_1275	0.61	+0.5
1,299,900	+		Synpcc7942_1275	0.61	+0.3
1,299,901	-		Synpcc7942_1275	0.61	+0.0
1,299,904	+		Synpcc7942_1275	0.62	+1.1
1,299,909	-		Synpcc7942_1275	0.62	-1.5
1,299,914	-		Synpcc7942_1275	0.62	-0.7
1,299,916	+		Synpcc7942_1275	0.63	+1.1
1,299,924	-		Synpcc7942_1275	0.63	-0.4
1,299,924	-		Synpcc7942_1275	0.63	+0.1
1,299,924	-		Synpcc7942_1275	0.63	+1.0
1,299,966	+		Synpcc7942_1275	0.67	+0.2
1,299,987	+		Synpcc7942_1275	0.69	+1.1
1,299,990	-		Synpcc7942_1275	0.69	+0.2
1,299,990	-		Synpcc7942_1275	0.69	+0.3
1,299,998	-		Synpcc7942_1275	0.70	+1.3
1,300,031	+				-0.7
1,300,031	+		Synpcc7942_1275	0.73	+0.2
1,300,031	+		Synpcc7942_1275	0.73	-0.8
1,300,049	-		Synpcc7942_1275	0.74	-0.2
1,300,054	-		Synpcc7942_1275	0.74	+0.1
1,300,058	-		Synpcc7942_1275	0.75	+0.9
1,300,071	+		Synpcc7942_1275	0.76	+0.3
1,300,071	+		Synpcc7942_1275	0.76	+7.1
1,300,071	+		Synpcc7942_1275	0.76	-0.7
1,300,071	+		Synpcc7942_1275	0.76	+0.6
1,300,071	+		Synpcc7942_1275	0.76	-2.1
1,300,079	-		Synpcc7942_1275	0.77	+0.7
1,300,079	-		Synpcc7942_1275	0.77	+0.4
1,300,079	-		Synpcc7942_1275	0.77	-0.5
1,300,079	-		Synpcc7942_1275	0.77	-0.4
1,300,079	-		Synpcc7942_1275	0.77	+1.3
1,300,079	-		Synpcc7942_1275	0.77	+0.2
1,300,079	-		Synpcc7942_1275	0.77	+0.2
1,300,095	+		Synpcc7942_1275	0.78	+0.3
1,300,109	-		Synpcc7942_1275	0.79	+0.6
1,300,152	-		Synpcc7942_1275	0.83	+0.5