Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34820

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
3,652,130	+		PGA1_c34810	0.33	+0.8
3,652,138	-		PGA1_c34810	0.33	+1.0
3,652,138	-		PGA1_c34810	0.33	-0.6
3,652,188	+		PGA1_c34810	0.37	+0.9
3,652,188	+		PGA1_c34810	0.37	-0.0
3,652,196	-		PGA1_c34810	0.38	-1.1
3,652,196	-		PGA1_c34810	0.38	+0.1
3,652,260	+		PGA1_c34810	0.43	+1.0
3,652,260	+		PGA1_c34810	0.43	+0.2
3,652,271	+		PGA1_c34810	0.44	-1.3
3,652,323	+		PGA1_c34810	0.48	-0.3
3,652,331	-		PGA1_c34810	0.49	-0.0
3,652,331	-		PGA1_c34810	0.49	+0.4
3,652,362	-		PGA1_c34810	0.51	+0.9
3,652,371	+		PGA1_c34810	0.52	-0.4
3,652,433	+		PGA1_c34810	0.57	-1.0
3,652,441	-		PGA1_c34810	0.58	+0.5
3,652,443	+		PGA1_c34810	0.58	+0.3
3,652,492	+		PGA1_c34810	0.62	-0.1
3,652,492	+		PGA1_c34810	0.62	-0.3
3,652,492	+		PGA1_c34810	0.62	+0.0
3,652,500	-		PGA1_c34810	0.62	+0.6
3,652,500	-		PGA1_c34810	0.62	+1.2
3,652,556	+		PGA1_c34810	0.67	+0.9
3,652,556	+		PGA1_c34810	0.67	-0.6
3,652,564	-		PGA1_c34810	0.67	-0.0
3,652,564	-		PGA1_c34810	0.67	-0.1
3,652,564	-		PGA1_c34810	0.67	+0.9
3,652,564	-		PGA1_c34810	0.67	+1.3
3,652,564	-		PGA1_c34810	0.67	+1.0
3,652,564	-		PGA1_c34810	0.67	+0.8
3,652,564	-		PGA1_c34810	0.67	+0.9
3,652,647	+		PGA1_c34810	0.74	+0.1
3,652,804	+		PGA1_c34810	0.87	+0.9
3,652,978	+				+1.2
3,653,052	-				+0.1
3,653,054	-				+0.8
3,653,140	+				-0.4
3,653,140	+				+1.0
3,653,140	+				-0.6
3,653,140	+				-0.1
3,653,150	+				+0.0
3,653,171	-				-0.3
3,653,208	+				+0.3
3,653,208	+				-0.8
3,653,235	-				-2.5
3,653,306	-		PGA1_c34820	0.13	-0.2
3,653,308	+		PGA1_c34820	0.13	-0.8
3,653,310	+		PGA1_c34820	0.13	+0.5
3,653,310	-		PGA1_c34820	0.13	-0.6
3,653,318	-		PGA1_c34820	0.14	-0.1
3,653,350	+		PGA1_c34820	0.16	-0.4
3,653,429	+		PGA1_c34820	0.20	+0.1
3,653,472	+		PGA1_c34820	0.22	+1.6
3,653,472	+		PGA1_c34820	0.22	-1.7
3,653,480	-		PGA1_c34820	0.23	+0.5
3,653,598	-		PGA1_c34820	0.29	-0.9
3,653,744	+		PGA1_c34820	0.37	-0.3
3,653,780	+		PGA1_c34820	0.39	+1.0
3,653,780	+		PGA1_c34820	0.39	+0.1
3,653,788	-		PGA1_c34820	0.39	-0.1
3,653,788	-		PGA1_c34820	0.39	-0.2
3,653,788	-		PGA1_c34820	0.39	+1.0
3,653,800	+		PGA1_c34820	0.40	+0.6
3,653,828	+		PGA1_c34820	0.41	-0.5
3,653,866	-		PGA1_c34820	0.43	+0.1
3,653,897	+		PGA1_c34820	0.45	-0.7
3,653,897	+		PGA1_c34820	0.45	+0.0
3,653,915	-		PGA1_c34820	0.46	-0.3
3,653,916	+		PGA1_c34820	0.46	-0.4
3,653,916	+		PGA1_c34820	0.46	-1.1
3,653,916	+		PGA1_c34820	0.46	-0.0
3,653,916	+		PGA1_c34820	0.46	-0.0
3,653,916	+		PGA1_c34820	0.46	-0.2
3,653,916	+		PGA1_c34820	0.46	-0.6
3,653,921	+		PGA1_c34820	0.46	+0.1
3,653,924	-		PGA1_c34820	0.46	-0.3
3,653,924	-		PGA1_c34820	0.46	-0.1
3,653,924	-		PGA1_c34820	0.46	-2.0
3,653,953	-		PGA1_c34820	0.48	-0.8
3,653,972	+		PGA1_c34820	0.49	+0.3
3,653,972	+		PGA1_c34820	0.49	-1.2
3,653,980	-		PGA1_c34820	0.49	+0.7
3,653,980	-		PGA1_c34820	0.49	-0.3
3,653,980	-		PGA1_c34820	0.49	-1.3
3,653,980	-		PGA1_c34820	0.49	-0.6
3,653,980	-		PGA1_c34820	0.49	-0.0
3,653,980	-		PGA1_c34820	0.49	+1.1
3,653,980	-		PGA1_c34820	0.49	+1.4
3,653,980	-		PGA1_c34820	0.49	-0.3
3,653,980	-		PGA1_c34820	0.49	-0.7
3,653,980	-		PGA1_c34820	0.49	+1.0
3,653,987	+		PGA1_c34820	0.50	-0.9
3,653,994	+		PGA1_c34820	0.50	+1.0
3,654,002	-		PGA1_c34820	0.50	-0.5
3,654,002	-		PGA1_c34820	0.50	-0.3
3,654,033	+		PGA1_c34820	0.52	-0.1
3,654,033	+		PGA1_c34820	0.52	+0.0
3,654,087	+		PGA1_c34820	0.55	-0.3
3,654,093	+		PGA1_c34820	0.55	+0.7
3,654,103	+		PGA1_c34820	0.56	-0.5
3,654,184	+		PGA1_c34820	0.60	+1.2
3,654,207	-		PGA1_c34820	0.61	+0.1
3,654,238	+		PGA1_c34820	0.63	+1.1
3,654,263	+		PGA1_c34820	0.64	+0.0
3,654,264	+		PGA1_c34820	0.64	+0.2
3,654,326	+		PGA1_c34820	0.68	-0.4
3,654,437	+		PGA1_c34820	0.74	+0.9
3,654,464	-		PGA1_c34820	0.75	+1.6
3,654,501	-		PGA1_c34820	0.77	+1.4
3,654,540	+		PGA1_c34820	0.79	+1.4
3,654,598	+		PGA1_c34820	0.82	-0.3
3,654,646	-		PGA1_c34820	0.85	-0.8
3,654,709	+		PGA1_c34820	0.88	-1.9
3,654,719	+		PGA1_c34820	0.89	-0.1
3,654,727	-		PGA1_c34820	0.89	-1.4
3,654,740	-		PGA1_c34820	0.90	+0.8
3,654,779	+				-0.1
3,654,787	-				-0.4
3,654,826	-				+0.5
3,654,835	+				+0.0
3,654,893	-				+0.2
3,654,936	+				-0.0
3,654,950	-				-0.0
3,654,974	+				+0.1
3,654,977	-				-0.7
3,654,983	+				-0.3
3,655,022	+				+0.8
3,655,056	-				-0.4
3,655,059	+				+0.1
3,655,105	+				-1.4
3,655,115	-		PGA1_c34830	0.10	+0.7
3,655,171	-		PGA1_c34830	0.13	-0.9
3,655,173	+		PGA1_c34830	0.13	+0.8
3,655,173	+		PGA1_c34830	0.13	+0.2
3,655,173	+		PGA1_c34830	0.13	+0.6
3,655,173	+		PGA1_c34830	0.13	-1.4
3,655,173	+		PGA1_c34830	0.13	+1.0
3,655,176	-		PGA1_c34830	0.14	+0.6
3,655,181	-		PGA1_c34830	0.14	+0.7
3,655,181	-		PGA1_c34830	0.14	-1.8
3,655,181	-		PGA1_c34830	0.14	+0.6
3,655,181	-		PGA1_c34830	0.14	+0.5
3,655,181	-		PGA1_c34830	0.14	-0.5
3,655,223	+		PGA1_c34830	0.16	-0.3
3,655,223	+		PGA1_c34830	0.16	+0.2
3,655,231	-		PGA1_c34830	0.17	-0.9
3,655,231	-		PGA1_c34830	0.17	+0.2
3,655,311	-		PGA1_c34830	0.21	+0.4
3,655,328	+		PGA1_c34830	0.22	-0.1
3,655,400	-		PGA1_c34830	0.26	-2.3
3,655,414	-		PGA1_c34830	0.27	+1.9
3,655,429	-		PGA1_c34830	0.27	+0.2
3,655,429	-		PGA1_c34830	0.27	+0.4
3,655,431	+		PGA1_c34830	0.27	-0.3
3,655,444	-		PGA1_c34830	0.28	-0.7
3,655,447	-		PGA1_c34830	0.28	-0.3
3,655,457	-		PGA1_c34830	0.29	-2.3
3,655,480	-		PGA1_c34830	0.30	+0.1
3,655,480	-		PGA1_c34830	0.30	-1.6
3,655,513	-		PGA1_c34830	0.32	+0.0
3,655,528	-		PGA1_c34830	0.33	-0.4
3,655,556	-		PGA1_c34830	0.34	+0.4
3,655,581	+		PGA1_c34830	0.36	+0.0
3,655,616	+		PGA1_c34830	0.38	-0.6
3,655,625	+		PGA1_c34830	0.38	+0.4
3,655,629	-		PGA1_c34830	0.38	-0.4
3,655,647	-		PGA1_c34830	0.39	+0.4
3,655,686	-		PGA1_c34830	0.41	+0.0
3,655,699	+		PGA1_c34830	0.42	+0.9
3,655,699	+		PGA1_c34830	0.42	+0.5
3,655,708	+		PGA1_c34830	0.43	+1.9
3,655,716	-		PGA1_c34830	0.43	+0.3
3,655,769	-		PGA1_c34830	0.46	+0.5
3,655,851	+		PGA1_c34830	0.50	-0.4
3,655,876	+		PGA1_c34830	0.52	-0.0
3,655,876	+		PGA1_c34830	0.52	+1.1
3,655,918	-		PGA1_c34830	0.54	-0.4