Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c30210

Experiment: Uridine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Uridine (N)
3,158,393	+				+0.1
3,158,415	+				-0.1
3,158,415	+				-0.4
3,158,415	+				-1.0
3,158,415	+				-1.1
3,158,415	+				+0.2
3,158,415	+				-0.1
3,158,415	+				-0.5
3,158,415	+				+1.1
3,158,415	+				-0.2
3,158,415	+				-0.8
3,158,415	+				+0.9
3,158,415	+				+0.4
3,158,415	+				-0.5
3,158,415	+				+0.2
3,158,415	+				-0.2
3,158,415	+				+0.2
3,158,415	+				-0.5
3,158,415	+				+0.7
3,158,415	+				-0.8
3,158,415	+				-0.0
3,158,415	+				+0.9
3,158,415	+				+0.5
3,158,415	+				+0.6
3,158,415	+				+1.1
3,158,415	+				+0.2
3,158,415	+				+0.6
3,158,415	+				+0.1
3,158,415	+				-0.3
3,158,415	+				-0.8
3,158,415	+				-0.1
3,158,415	+				+0.6
3,158,415	+				+0.2
3,158,415	+				-0.5
3,158,415	+				-0.2
3,158,423	-				+1.2
3,158,423	-				+0.6
3,158,423	-				-0.0
3,158,423	-				+0.3
3,158,423	-				-0.2
3,158,423	-				-0.9
3,158,423	-				+1.7
3,158,423	-				+0.1
3,158,423	-				+0.5
3,158,423	-				+0.9
3,158,423	-				+1.1
3,158,423	-				+0.6
3,158,423	-				+0.0
3,158,423	-				+0.8
3,158,423	-				-1.1
3,158,423	-				+1.0
3,158,423	-				+0.5
3,158,423	-				+0.5
3,158,423	-				-0.8
3,158,423	-				+0.5
3,158,423	-				+1.1
3,158,423	-				-0.2
3,158,423	-				+0.1
3,158,423	-				+0.2
3,158,423	-				+0.9
3,158,423	-				+0.6
3,158,423	-				+0.7
3,158,423	-				+0.3
3,158,423	-				-0.3
3,158,423	-				+0.3
3,158,470	+				+0.4
3,158,470	+				-1.0
3,158,560	+		PGA1_c30200	0.10	-2.2
3,158,609	-		PGA1_c30200	0.16	-2.1
3,158,616	+		PGA1_c30200	0.17	-2.3
3,158,616	+		PGA1_c30200	0.17	-0.9
3,158,636	+		PGA1_c30200	0.20	-3.1
3,158,707	+		PGA1_c30200	0.28	-3.7
3,158,715	-		PGA1_c30200	0.29	-2.5
3,158,718	+		PGA1_c30200	0.29	-2.1
3,158,763	+		PGA1_c30200	0.35	-3.9
3,158,763	+		PGA1_c30200	0.35	-2.6
3,158,770	-		PGA1_c30200	0.36	-3.1
3,158,771	-		PGA1_c30200	0.36	-1.8
3,158,771	-		PGA1_c30200	0.36	-3.3
3,158,804	-		PGA1_c30200	0.40	-2.9
3,158,867	+		PGA1_c30200	0.47	-2.4
3,158,876	+		PGA1_c30200	0.48	-2.8
3,158,947	+		PGA1_c30200	0.57	-2.0
3,158,947	-		PGA1_c30200	0.57	-0.5
3,159,097	+		PGA1_c30200	0.75	-3.7
3,159,100	+		PGA1_c30200	0.75	-3.5
3,159,146	-		PGA1_c30200	0.81	-0.4
3,159,146	-		PGA1_c30200	0.81	-2.7
3,159,175	+		PGA1_c30200	0.84	-3.1
3,159,188	-		PGA1_c30200	0.86	-1.5
3,159,220	-		PGA1_c30200	0.90	-2.2
3,159,241	-				-1.6
3,159,299	-				+0.1
3,159,389	+		PGA1_c30210	0.15	+0.7
3,159,416	+		PGA1_c30210	0.21	+1.0
3,159,416	+		PGA1_c30210	0.21	-0.6
3,159,416	+		PGA1_c30210	0.21	-0.4
3,159,443	+		PGA1_c30210	0.26	-0.6
3,159,449	+		PGA1_c30210	0.28	-0.5
3,159,451	-		PGA1_c30210	0.28	+0.6
3,159,451	-		PGA1_c30210	0.28	+0.9
3,159,465	-		PGA1_c30210	0.31	+1.6
3,159,465	-		PGA1_c30210	0.31	-0.3
3,159,471	-		PGA1_c30210	0.32	+0.4
3,159,513	-		PGA1_c30210	0.41	+2.0
3,159,536	+		PGA1_c30210	0.46	+0.7
3,159,544	-		PGA1_c30210	0.48	-0.2
3,159,568	+		PGA1_c30210	0.53	-0.1
3,159,568	+		PGA1_c30210	0.53	-1.4
3,159,568	+		PGA1_c30210	0.53	-0.1
3,159,568	+		PGA1_c30210	0.53	+0.4
3,159,568	+		PGA1_c30210	0.53	-1.2
3,159,571	+		PGA1_c30210	0.54	-0.2
3,159,576	-		PGA1_c30210	0.55	-0.2
3,159,576	-		PGA1_c30210	0.55	+0.4
3,159,576	-		PGA1_c30210	0.55	+1.7
3,159,576	-		PGA1_c30210	0.55	+0.8
3,159,576	-		PGA1_c30210	0.55	-0.4
3,159,576	-		PGA1_c30210	0.55	-0.4
3,159,579	-		PGA1_c30210	0.55	+0.3
3,159,663	+		PGA1_c30210	0.73	+1.2
3,159,663	+		PGA1_c30210	0.73	+1.3
3,159,671	-		PGA1_c30210	0.75	+1.3
3,159,679	+		PGA1_c30210	0.77	+1.0
3,159,697	+		PGA1_c30210	0.81	+0.7
3,159,699	+		PGA1_c30210	0.81	-1.7
3,159,774	-				-1.6
3,159,834	+				-0.0
3,159,839	-				+0.1
3,159,864	+				+0.6
3,159,878	-				-0.8
3,159,883	-				+2.4
3,159,910	+				+1.3
3,159,941	+				-0.5
3,159,956	+				+0.3
3,160,004	-		PGA1_c30220	0.15	+1.0
3,160,004	-		PGA1_c30220	0.15	+1.1
3,160,029	-		PGA1_c30220	0.17	+0.1
3,160,067	+		PGA1_c30220	0.21	+0.7
3,160,067	+		PGA1_c30220	0.21	-1.9
3,160,075	-		PGA1_c30220	0.22	+1.0
3,160,075	-		PGA1_c30220	0.22	-0.7
3,160,104	+		PGA1_c30220	0.25	+0.7
3,160,135	-		PGA1_c30220	0.28	+0.4
3,160,147	+		PGA1_c30220	0.29	+1.0
3,160,167	+		PGA1_c30220	0.31	+1.2
3,160,197	-		PGA1_c30220	0.34	-0.1
3,160,264	-		PGA1_c30220	0.41	+0.8
3,160,274	-		PGA1_c30220	0.42	-0.1
3,160,300	-		PGA1_c30220	0.44	-1.1
3,160,311	+		PGA1_c30220	0.45	+1.1
3,160,329	-		PGA1_c30220	0.47	-0.1
3,160,389	-		PGA1_c30220	0.53	-1.9
3,160,408	-		PGA1_c30220	0.55	+0.3
3,160,432	-		PGA1_c30220	0.57	+0.4
3,160,453	-		PGA1_c30220	0.59	+0.3
3,160,453	-		PGA1_c30220	0.59	+0.2
3,160,502	-		PGA1_c30220	0.64	+0.8
3,160,502	-		PGA1_c30220	0.64	-0.8
3,160,522	+		PGA1_c30220	0.66	-0.6
3,160,568	-		PGA1_c30220	0.71	+0.5
3,160,573	-		PGA1_c30220	0.71	+1.2
3,160,584	+		PGA1_c30220	0.72	-1.1
3,160,586	+		PGA1_c30220	0.73	+0.4
3,160,602	-		PGA1_c30220	0.74	-0.1
3,160,646	+		PGA1_c30220	0.79	-0.6
3,160,657	+		PGA1_c30220	0.80	+1.7
3,160,701	+		PGA1_c30220	0.84	-2.0
3,160,741	-		PGA1_c30220	0.88	-0.7
3,160,746	+		PGA1_c30220	0.89	+0.9
3,160,746	+		PGA1_c30220	0.89	-0.5
3,160,754	-		PGA1_c30220	0.89	+0.7
3,160,754	-		PGA1_c30220	0.89	+0.7