Experiment: MoLS4 with L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0367 and tRNA-Met are separated by 143 nucleotides tRNA-Met and DVU0368 are separated by 692 nucleotides DVU0368 and DVU0369 are separated by 131 nucleotides DVU0369 and DVU0370 are separated by 91 nucleotides DVU0370 and DVU0371 are separated by 0 nucleotides
DVU0367: DVU0367 - Ser/Thr protein phosphatase family protein (TIGR), at 416,195 to 416,929
DVU0367
DVU_tRNA-Met-1: tRNA-Met - tRNA with anticodon CAT for Met (VIMSS-AUTO), at 417,073 to 417,149
tRNA-Met
DVU0368: DVU0368 - hypothetical protein (TIGR), at 417,842 to 417,946
DVU0368
DVU0369: DVU0369 - hypothetical protein (TIGR), at 418,078 to 418,176
DVU0369
DVU0370: DVU0370 - hypothetical protein (TIGR), at 418,268 to 418,411
DVU0370
DVU0371: DVU0371 - conserved hypothetical protein (TIGR), at 418,412 to 419,836
DVU0371
Position (kb) 417
418 Strain fitness (log2 ratio) -1
0
1
2 at 416.847 kb on - strand, within DVU0367 at 416.847 kb on - strand, within DVU0367 at 416.945 kb on + strand at 416.945 kb on + strand at 417.205 kb on + strand at 417.213 kb on - strand at 417.274 kb on - strand at 417.283 kb on + strand at 417.285 kb on - strand at 417.308 kb on + strand at 417.398 kb on - strand at 417.435 kb on + strand at 417.497 kb on + strand at 417.619 kb on - strand at 417.619 kb on - strand at 417.628 kb on - strand at 417.715 kb on - strand at 417.749 kb on + strand at 417.784 kb on + strand at 417.785 kb on + strand at 417.793 kb on - strand at 417.793 kb on - strand at 417.814 kb on + strand at 417.814 kb on + strand at 417.815 kb on + strand at 417.822 kb on - strand at 417.822 kb on - strand at 417.822 kb on - strand at 417.913 kb on + strand, within DVU0368 at 417.921 kb on - strand, within DVU0368 at 418.453 kb on - strand at 418.469 kb on + strand at 418.607 kb on + strand, within DVU0371 at 418.710 kb on + strand, within DVU0371 at 418.718 kb on - strand, within DVU0371 at 418.728 kb on - strand, within DVU0371 at 418.767 kb on + strand, within DVU0371 at 418.830 kb on - strand, within DVU0371 at 418.833 kb on + strand, within DVU0371 at 418.841 kb on + strand, within DVU0371 at 418.860 kb on + strand, within DVU0371 at 418.866 kb on + strand, within DVU0371 at 418.886 kb on + strand, within DVU0371 at 418.891 kb on + strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.904 kb on - strand, within DVU0371 at 418.904 kb on - strand, within DVU0371 at 418.906 kb on + strand, within DVU0371 at 418.928 kb on - strand, within DVU0371
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Phenylalanine (N) remove 416,847 - DVU0367 0.89 -0.2 416,847 - DVU0367 0.89 +0.2 416,945 + -0.1 416,945 + -0.7 417,205 + -0.4 417,213 - -1.1 417,274 - -0.2 417,283 + -0.1 417,285 - -0.3 417,308 + -1.0 417,398 - +0.3 417,435 + -0.1 417,497 + -0.4 417,619 - -0.5 417,619 - -0.6 417,628 - -0.6 417,715 - +0.1 417,749 + -0.1 417,784 + -0.3 417,785 + -0.1 417,793 - -0.1 417,793 - +0.4 417,814 + +0.0 417,814 + -0.1 417,815 + -0.9 417,822 - +1.2 417,822 - -0.2 417,822 - +0.5 417,913 + DVU0368 0.68 +0.2 417,921 - DVU0368 0.75 +0.2 418,453 - +0.4 418,469 + -0.3 418,607 + DVU0371 0.14 -0.1 418,710 + DVU0371 0.21 -0.1 418,718 - DVU0371 0.21 +0.3 418,728 - DVU0371 0.22 -0.3 418,767 + DVU0371 0.25 +0.7 418,830 - DVU0371 0.29 +1.9 418,833 + DVU0371 0.30 +0.3 418,841 + DVU0371 0.30 +0.2 418,860 + DVU0371 0.31 +0.8 418,866 + DVU0371 0.32 -0.3 418,886 + DVU0371 0.33 +0.1 418,891 + DVU0371 0.34 -0.6 418,894 - DVU0371 0.34 -0.2 418,894 - DVU0371 0.34 +0.8 418,894 - DVU0371 0.34 +0.7 418,904 - DVU0371 0.35 -0.0 418,904 - DVU0371 0.35 +0.2 418,906 + DVU0371 0.35 -0.3 418,928 - DVU0371 0.36 +0.1
Or see this region's nucleotide sequence