Experiment: MoLS4 with L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mltC and DVU1537 are separated by 129 nucleotides DVU1537 and DVU1538 are separated by 263 nucleotides DVU1538 and glpX are separated by 102 nucleotides
DVU1536: mltC - transglycosylase, SLT family (TIGR), at 1,603,093 to 1,604,229
mltC
DVU1537: DVU1537 - lipoprotein, putative (TIGR), at 1,604,359 to 1,604,925
DVU1537
DVU1538: DVU1538 - hypothetical protein (TIGR), at 1,605,189 to 1,605,713
DVU1538
DVU1539: glpX - fructose-1,6-bisphosphatase, class II (TIGR), at 1,605,816 to 1,606,799
glpX
Position (kb)
1605
1606 Strain fitness (log2 ratio)
-1
0
1
2 at 1604.347 kb on - strand at 1604.361 kb on + strand at 1604.374 kb on - strand at 1604.488 kb on + strand, within DVU1537 at 1604.607 kb on + strand, within DVU1537 at 1604.660 kb on - strand, within DVU1537 at 1604.684 kb on - strand, within DVU1537 at 1604.690 kb on - strand, within DVU1537 at 1604.750 kb on + strand, within DVU1537 at 1604.813 kb on + strand, within DVU1537 at 1604.912 kb on + strand at 1605.008 kb on + strand at 1605.008 kb on + strand at 1605.016 kb on - strand at 1605.016 kb on - strand at 1605.131 kb on - strand at 1605.226 kb on + strand at 1605.230 kb on + strand at 1605.297 kb on - strand, within DVU1538 at 1605.299 kb on - strand, within DVU1538 at 1605.336 kb on + strand, within DVU1538 at 1605.406 kb on - strand, within DVU1538 at 1605.515 kb on - strand, within DVU1538 at 1605.877 kb on - strand at 1605.877 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Phenylalanine (N) remove 1,604,347 - -0.1 1,604,361 + -0.5 1,604,374 - -0.5 1,604,488 + DVU1537 0.23 -0.3 1,604,607 + DVU1537 0.44 -0.6 1,604,660 - DVU1537 0.53 -0.6 1,604,684 - DVU1537 0.57 -0.2 1,604,690 - DVU1537 0.58 -0.5 1,604,750 + DVU1537 0.69 -0.5 1,604,813 + DVU1537 0.80 +0.6 1,604,912 + -0.3 1,605,008 + -0.1 1,605,008 + +1.2 1,605,016 - +0.2 1,605,016 - +1.8 1,605,131 - -0.1 1,605,226 + +0.1 1,605,230 + +0.0 1,605,297 - DVU1538 0.21 +1.4 1,605,299 - DVU1538 0.21 -0.2 1,605,336 + DVU1538 0.28 -0.2 1,605,406 - DVU1538 0.41 -0.1 1,605,515 - DVU1538 0.62 +0.6 1,605,877 - -0.1 1,605,877 - -0.7
Or see this region's nucleotide sequence