Experiment: MoLS4 with L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1380 and DVU1381 overlap by 20 nucleotides DVU1381 and DVU1382 are separated by 60 nucleotides DVU1382 and DORF10862 are separated by 89 nucleotides DORF10862 and pyrR are separated by 145 nucleotides
DVU1380: DVU1380 - hypothetical protein (TIGR), at 1,455,113 to 1,455,343
DVU1380
DVU1381: DVU1381 - hypothetical protein (TIGR), at 1,455,324 to 1,455,539
DVU1381
DVU1382: DVU1382 - HesB family selenoprotein (TIGR), at 1,455,600 to 1,455,923
DVU1382
DORF10862: DORF10862 - SEED: HesB-like domain, at 1,456,013 to 1,456,315
DORF10862
DVU1384: pyrR - pyrimidine operon regulatory protein (TIGR), at 1,456,461 to 1,456,997
pyrR
Position (kb)
1456
1457 Strain fitness (log2 ratio)
-1
0
1 at 1455.031 kb on + strand at 1455.066 kb on + strand at 1455.094 kb on + strand at 1455.101 kb on + strand at 1455.134 kb on - strand at 1455.205 kb on - strand, within DVU1380 at 1455.246 kb on + strand, within DVU1380 at 1455.305 kb on + strand, within DVU1380 at 1455.930 kb on - strand at 1456.167 kb on - strand, within DORF10862 at 1456.204 kb on + strand, within DORF10862 at 1456.402 kb on + strand at 1456.416 kb on + strand at 1456.436 kb on - strand at 1456.448 kb on - strand at 1456.469 kb on - strand at 1456.526 kb on + strand, within pyrR at 1456.539 kb on + strand, within pyrR at 1456.636 kb on - strand, within pyrR at 1456.716 kb on - strand, within pyrR at 1456.735 kb on + strand, within pyrR at 1457.097 kb on + strand at 1457.105 kb on - strand at 1457.105 kb on - strand at 1457.188 kb on - strand at 1457.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Phenylalanine (N) remove 1,455,031 + +0.1 1,455,066 + -0.2 1,455,094 + +0.2 1,455,101 + +0.6 1,455,134 - -1.0 1,455,205 - DVU1380 0.40 -0.6 1,455,246 + DVU1380 0.58 +0.1 1,455,305 + DVU1380 0.83 -0.3 1,455,930 - -1.4 1,456,167 - DORF10862 0.51 +0.5 1,456,204 + DORF10862 0.63 -0.0 1,456,402 + -0.1 1,456,416 + -0.1 1,456,436 - +0.6 1,456,448 - -0.6 1,456,469 - -0.2 1,456,526 + pyrR DVU1384 0.12 +0.2 1,456,539 + pyrR DVU1384 0.15 -1.5 1,456,636 - pyrR DVU1384 0.33 -0.1 1,456,716 - pyrR DVU1384 0.47 -0.0 1,456,735 + pyrR DVU1384 0.51 +0.5 1,457,097 + +0.4 1,457,105 - +0.4 1,457,105 - -0.2 1,457,188 - +0.0 1,457,304 + -1.3
Or see this region's nucleotide sequence