Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01876

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
2,013,087	+		CCNA_01875	0.22	-1.0
2,013,128	-		CCNA_01875	0.25	-1.6
2,013,183	-		CCNA_01875	0.30	-0.3
2,013,195	+		CCNA_01875	0.31	+1.7
2,013,213	+		CCNA_01875	0.33	-0.4
2,013,240	+		CCNA_01875	0.35	-1.0
2,013,243	-		CCNA_01875	0.35	+0.6
2,013,248	-		CCNA_01875	0.36	-1.6
2,013,248	-		CCNA_01875	0.36	-1.2
2,013,248	-		CCNA_01875	0.36	+0.1
2,013,253	-		CCNA_01875	0.36	-1.8
2,013,284	-		CCNA_01875	0.39	-0.1
2,013,284	-		CCNA_01875	0.39	+0.1
2,013,284	-		CCNA_01875	0.39	+1.2
2,013,284	-		CCNA_01875	0.39	+1.4
2,013,294	-		CCNA_01875	0.40	+0.6
2,013,310	-		CCNA_01875	0.41	-1.6
2,013,315	-		CCNA_01875	0.42	-1.4
2,013,316	+		CCNA_01875	0.42	-1.3
2,013,331	-		CCNA_01875	0.43	-0.6
2,013,334	-		CCNA_01875	0.43	+0.1
2,013,343	+		CCNA_01875	0.44	+1.1
2,013,348	+		CCNA_01875	0.45	-0.3
2,013,458	+		CCNA_01875	0.54	-0.9
2,013,481	-		CCNA_01875	0.56	+0.9
2,013,495	+		CCNA_01875	0.57	-0.5
2,013,495	+		CCNA_01875	0.57	+0.8
2,013,495	+		CCNA_01875	0.57	+0.7
2,013,524	+		CCNA_01875	0.60	+0.0
2,013,532	-		CCNA_01875	0.61	+0.9
2,013,544	-		CCNA_01875	0.62	+0.4
2,013,583	+		CCNA_01875	0.65	-1.2
2,013,621	+		CCNA_01875	0.68	-0.9
2,013,621	+		CCNA_01875	0.68	+0.7
2,013,621	+		CCNA_01875	0.68	+1.2
2,013,629	-		CCNA_01875	0.69	+0.4
2,013,634	+		CCNA_01875	0.69	+0.1
2,013,674	+		CCNA_01875	0.73	-0.2
2,013,731	+		CCNA_01875	0.78	-1.2
2,013,787	+		CCNA_01875	0.83	-0.1
2,013,810	-		CCNA_01875	0.85	+0.6
2,013,837	+		CCNA_01875	0.87	-1.2
2,013,840	-		CCNA_01875	0.87	+0.8
2,013,845	-		CCNA_01875	0.88	-1.8
2,013,870	-				-1.2
2,013,952	-				-0.2
2,013,986	-				-1.1
2,014,020	+				+0.8
2,014,045	-				-1.6
2,014,045	-				+0.5
2,014,045	-				+0.7
2,014,065	-				-0.0
2,014,118	-				-0.4
2,014,142	-				+0.1
2,014,146	+				+0.1
2,014,175	-				+0.9
2,014,182	-				+0.1
2,014,221	+		CCNA_01876	0.10	+2.9
2,014,265	-		CCNA_01876	0.13	+0.4
2,014,265	-		CCNA_01876	0.13	-0.0
2,014,285	-		CCNA_01876	0.14	-1.0
2,014,308	-		CCNA_01876	0.16	+0.8
2,014,308	-		CCNA_01876	0.16	+0.6
2,014,359	+		CCNA_01876	0.19	-0.5
2,014,369	+		CCNA_01876	0.19	-1.3
2,014,391	-		CCNA_01876	0.21	-0.8
2,014,495	+		CCNA_01876	0.27	-0.6
2,014,495	+				-0.5
2,014,495	+		CCNA_01876	0.27	+0.2
2,014,546	+		CCNA_01876	0.30	-0.5
2,014,604	+		CCNA_01876	0.33	-0.6
2,014,649	+		CCNA_01876	0.36	+0.4
2,014,649	+		CCNA_01876	0.36	-0.3
2,014,649	+		CCNA_01876	0.36	-0.7
2,014,649	+		CCNA_01876	0.36	-0.1
2,014,657	-		CCNA_01876	0.37	-0.4
2,014,683	+		CCNA_01876	0.38	+1.4
2,014,689	-		CCNA_01876	0.38	+0.6
2,014,691	-		CCNA_01876	0.39	-0.1
2,014,767	+		CCNA_01876	0.43	-1.0
2,014,771	+		CCNA_01876	0.43	+1.1
2,014,775	-		CCNA_01876	0.44	-0.8
2,014,827	-		CCNA_01876	0.47	+0.6
2,014,906	+		CCNA_01876	0.51	-1.8
2,014,918	+		CCNA_01876	0.52	+0.6
2,015,016	+		CCNA_01876	0.58	+0.1
2,015,053	+		CCNA_01876	0.60	-2.2
2,015,053	-		CCNA_01876	0.60	-0.3
2,015,059	+		CCNA_01876	0.61	-0.3
2,015,059	+		CCNA_01876	0.61	-3.1
2,015,059	+		CCNA_01876	0.61	-1.6
2,015,059	+		CCNA_01876	0.61	-1.6
2,015,067	-		CCNA_01876	0.61	+1.1
2,015,067	-		CCNA_01876	0.61	-0.1
2,015,067	-		CCNA_01876	0.61	+0.5
2,015,067	-		CCNA_01876	0.61	-0.1
2,015,067	-		CCNA_01876	0.61	+1.1
2,015,067	-		CCNA_01876	0.61	+0.1
2,015,142	-		CCNA_01876	0.66	-0.3
2,015,144	+		CCNA_01876	0.66	-2.1
2,015,152	-		CCNA_01876	0.66	-1.0
2,015,152	-		CCNA_01876	0.66	-1.0
2,015,164	+		CCNA_01876	0.67	+0.8
2,015,208	+		CCNA_01876	0.70	-0.1
2,015,247	+		CCNA_01876	0.72	-2.3
2,015,255	-		CCNA_01876	0.72	+1.4
2,015,255	-		CCNA_01876	0.72	+0.1
2,015,378	-		CCNA_01876	0.80	-1.6
2,015,403	-		CCNA_01876	0.81	-1.6
2,015,451	-		CCNA_01876	0.84	-0.2
2,015,474	-		CCNA_01876	0.85	-1.1
2,015,521	-		CCNA_01876	0.88	+0.1
2,015,524	-		CCNA_01876	0.88	+0.1
2,015,552	+				-1.6
2,015,560	-				+0.6
2,015,597	+				+0.1
2,015,602	+				+2.1
2,015,602	+				-1.1
2,015,628	+				-0.9
2,015,662	-				-0.1
2,015,683	-				-0.5
2,015,688	-				+0.1
2,015,739	+				-0.1
2,015,747	-				-1.5
2,015,764	-				+0.7
2,015,796	+				-0.1
2,015,806	-				+0.4
2,015,834	+				-1.1
2,015,846	+				+0.5
2,015,878	+				-0.1
2,015,884	+				-0.3
2,015,886	-				-1.3
2,015,889	+				-0.6
2,015,889	+				-1.5
2,015,889	+				+1.0
2,015,897	-				-1.5
2,015,897	-				-2.0
2,015,897	-				-1.8
2,015,960	-				-0.3
2,015,963	+				-1.0
2,016,005	+		CCNA_01877	0.10	+0.2
2,016,050	+		CCNA_01877	0.16	+0.2
2,016,058	-		CCNA_01877	0.17	-0.5
2,016,058	-		CCNA_01877	0.17	+0.2
2,016,058	-		CCNA_01877	0.17	-2.2
2,016,083	+		CCNA_01877	0.20	-1.6
2,016,091	-		CCNA_01877	0.20	+0.6
2,016,100	+		CCNA_01877	0.21	-0.7
2,016,134	+		CCNA_01877	0.25	-1.6
2,016,180	+		CCNA_01877	0.31	+0.1
2,016,264	+		CCNA_01877	0.41	-0.3
2,016,270	+		CCNA_01877	0.41	+0.8
2,016,290	+		CCNA_01877	0.44	-2.9
2,016,290	+		CCNA_01877	0.44	+0.2
2,016,290	+		CCNA_01877	0.44	-1.0
2,016,290	+		CCNA_01877	0.44	-0.6
2,016,290	+		CCNA_01877	0.44	-2.0
2,016,298	-		CCNA_01877	0.44	-0.1
2,016,298	-		CCNA_01877	0.44	-0.4
2,016,330	+		CCNA_01877	0.48	-1.3
2,016,355	+		CCNA_01877	0.51	-1.2
2,016,388	+		CCNA_01877	0.55	+0.4
2,016,396	+		CCNA_01877	0.56	+0.8
2,016,396	-		CCNA_01877	0.56	+0.5
2,016,473	+		CCNA_01877	0.65	-1.0
2,016,475	+		CCNA_01877	0.65	-0.1
2,016,504	-		CCNA_01877	0.68	-0.9
2,016,516	-		CCNA_01877	0.70	+0.6
2,016,529	+		CCNA_01877	0.71	+0.9
2,016,537	-		CCNA_01877	0.72	+0.6
2,016,556	+		CCNA_01877	0.74	-0.7
2,016,583	-		CCNA_01877	0.78	-0.6
2,016,593	-		CCNA_01877	0.79	-1.2
2,016,593	-		CCNA_01877	0.79	-1.1
2,016,595	+		CCNA_01877	0.79	+1.9
2,016,595	+		CCNA_01877	0.79	-0.5
2,016,640	+		CCNA_01877	0.84	+0.5
2,016,655	+		CCNA_01877	0.86	+0.9
2,016,655	+		CCNA_01877	0.86	-0.2
2,016,674	+		CCNA_01877	0.88	+1.1
2,016,690	+				+0.2