Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01226

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,352,186	+		CCNA_01225	0.11	-0.6
1,352,194	-		CCNA_01225	0.12	-0.6
1,352,194	-		CCNA_01225	0.12	-0.3
1,352,222	+		CCNA_01225	0.15	-0.6
1,352,222	+		CCNA_01225	0.15	-0.6
1,352,222	+		CCNA_01225	0.15	-0.2
1,352,230	-		CCNA_01225	0.15	-0.3
1,352,230	-		CCNA_01225	0.15	+0.1
1,352,230	-		CCNA_01225	0.15	+0.5
1,352,230	-		CCNA_01225	0.15	+0.7
1,352,238	-		CCNA_01225	0.16	-0.6
1,352,303	+		CCNA_01225	0.22	-0.3
1,352,313	-		CCNA_01225	0.23	-1.7
1,352,381	-		CCNA_01225	0.29	+0.7
1,352,390	+		CCNA_01225	0.30	-1.0
1,352,514	-		CCNA_01225	0.41	-0.6
1,352,542	-		CCNA_01225	0.43	-0.1
1,352,585	-		CCNA_01225	0.47	+0.2
1,352,585	-		CCNA_01225	0.47	+0.2
1,352,594	+		CCNA_01225	0.48	-1.1
1,352,675	+		CCNA_01225	0.55	+1.8
1,352,685	+		CCNA_01225	0.56	-1.5
1,352,693	-		CCNA_01225	0.56	-1.1
1,352,698	-		CCNA_01225	0.57	-0.1
1,352,702	+		CCNA_01225	0.57	+2.2
1,352,734	+		CCNA_01225	0.60	-1.3
1,352,742	-		CCNA_01225	0.61	-0.1
1,352,748	+		CCNA_01225	0.61	-1.7
1,352,756	-		CCNA_01225	0.62	+1.1
1,352,758	+		CCNA_01225	0.62	-0.1
1,352,767	+		CCNA_01225	0.63	+0.3
1,352,776	-		CCNA_01225	0.64	-0.7
1,352,779	+		CCNA_01225	0.64	-1.0
1,352,787	-		CCNA_01225	0.65	-0.2
1,352,817	+		CCNA_01225	0.67	+0.9
1,352,817	+		CCNA_01225	0.67	+0.8
1,352,817	+		CCNA_01225	0.67	-0.7
1,352,817	+		CCNA_01225	0.67	-1.3
1,352,818	-		CCNA_01225	0.67	+0.3
1,352,825	-		CCNA_01225	0.68	-0.6
1,352,825	-		CCNA_01225	0.68	+1.3
1,352,825	-		CCNA_01225	0.68	+0.8
1,352,825	-		CCNA_01225	0.68	+0.5
1,352,825	-		CCNA_01225	0.68	+0.2
1,352,825	-		CCNA_01225	0.68	+0.1
1,352,842	+		CCNA_01225	0.70	-0.9
1,352,850	-		CCNA_01225	0.70	-0.4
1,352,850	-		CCNA_01225	0.70	+0.2
1,352,860	-		CCNA_01225	0.71	+0.4
1,352,868	-		CCNA_01225	0.72	-0.2
1,352,868	-		CCNA_01225	0.72	-0.2
1,352,872	+		CCNA_01225	0.72	-1.4
1,352,877	+		CCNA_01225	0.73	+1.7
1,352,885	-		CCNA_01225	0.73	+0.0
1,352,934	+		CCNA_01225	0.78	+0.7
1,352,979	+		CCNA_01225	0.82	-0.1
1,353,057	-		CCNA_01225	0.89	-1.4
1,353,057	-		CCNA_01225	0.89	-1.6
1,353,057	-		CCNA_01225	0.89	+0.3
1,353,077	-				-0.2
1,353,083	-				+0.9
1,353,121	+				-0.4
1,353,125	+				+1.8
1,353,129	-				-0.8
1,353,134	-				+0.2
1,353,150	+				-1.1
1,353,174	+				-0.5
1,353,182	-				+1.3
1,353,182	-				+1.8
1,353,192	-				-0.1
1,353,192	-				-1.4
1,353,200	+				-1.7
1,353,225	-				-1.6
1,353,230	-				+0.8
1,353,230	-				+0.3
1,353,254	+		CCNA_01226	0.11	+0.5
1,353,262	-		CCNA_01226	0.12	-0.6
1,353,379	-		CCNA_01226	0.30	-0.2
1,353,385	+		CCNA_01226	0.31	-2.0
1,353,412	-		CCNA_01226	0.36	-2.3
1,353,468	-		CCNA_01226	0.45	-0.6
1,353,468	-		CCNA_01226	0.45	+0.3
1,353,480	-		CCNA_01226	0.46	+0.0
1,353,480	-		CCNA_01226	0.46	-0.9
1,353,480	-		CCNA_01226	0.46	-2.4
1,353,485	-		CCNA_01226	0.47	+0.8
1,353,491	+		CCNA_01226	0.48	-0.5
1,353,521	-		CCNA_01226	0.53	+0.4
1,353,560	-		CCNA_01226	0.59	-0.9
1,353,603	-		CCNA_01226	0.66	-1.9
1,353,604	+		CCNA_01226	0.66	-2.4
1,353,631	+		CCNA_01226	0.70	-1.2
1,353,638	-		CCNA_01226	0.71	-0.6
1,353,638	-		CCNA_01226	0.71	-0.3
1,353,651	-		CCNA_01226	0.73	-2.6
1,353,660	-		CCNA_01226	0.75	-1.7
1,353,713	+		CCNA_01226	0.83	+0.0
1,353,736	+		CCNA_01226	0.87	-0.9
1,353,817	-				-0.2
1,353,817	-				+1.2
1,353,829	+				-0.6
1,353,829	+				+1.5
1,353,852	+				-2.3
1,353,874	+				+0.0
1,353,928	+				-0.4
1,353,936	-				-0.7
1,353,975	-				-0.3
1,353,989	+				+0.4
1,354,011	+				+0.5
1,354,022	+				+0.2
1,354,082	+				+0.8
1,354,089	+		CCNA_01227	0.10	+0.7
1,354,089	+		CCNA_01227	0.10	+0.4
1,354,089	+		CCNA_01227	0.10	+0.2
1,354,094	+		CCNA_01227	0.11	+0.7
1,354,097	-		CCNA_01227	0.11	+0.1
1,354,097	-		CCNA_01227	0.11	-0.5
1,354,102	-		CCNA_01227	0.11	-0.1
1,354,205	-		CCNA_01227	0.21	-0.4
1,354,221	-		CCNA_01227	0.22	-0.6
1,354,253	+		CCNA_01227	0.25	-0.7
1,354,278	+		CCNA_01227	0.28	+0.3
1,354,325	+		CCNA_01227	0.32	+0.1
1,354,325	+		CCNA_01227	0.32	+0.7
1,354,325	+		CCNA_01227	0.32	+1.5
1,354,344	+		CCNA_01227	0.34	-1.1
1,354,344	+		CCNA_01227	0.34	-1.9
1,354,346	+		CCNA_01227	0.34	+0.6
1,354,386	-		CCNA_01227	0.38	+0.5
1,354,386	-		CCNA_01227	0.38	+1.7
1,354,388	+		CCNA_01227	0.38	-0.3
1,354,396	-		CCNA_01227	0.39	+2.0
1,354,432	-		CCNA_01227	0.42	+0.1
1,354,466	+		CCNA_01227	0.45	-0.3
1,354,466	+		CCNA_01227	0.45	+0.3
1,354,466	+		CCNA_01227	0.45	-1.8
1,354,466	+		CCNA_01227	0.45	+0.2
1,354,466	+		CCNA_01227	0.45	-0.1
1,354,466	+		CCNA_01227	0.45	+0.3
1,354,474	-		CCNA_01227	0.46	-0.2
1,354,474	-		CCNA_01227	0.46	-0.2
1,354,479	-		CCNA_01227	0.47	+1.7
1,354,486	-		CCNA_01227	0.47	-0.2
1,354,526	+				+0.4
1,354,526	+		CCNA_01227	0.51	+0.6
1,354,534	-		CCNA_01227	0.52	+1.4
1,354,539	+		CCNA_01227	0.52	-0.4
1,354,539	+		CCNA_01227	0.52	+0.4
1,354,540	-		CCNA_01227	0.52	+0.1
1,354,544	+				+1.3
1,354,544	+		CCNA_01227	0.53	-0.3
1,354,547	-		CCNA_01227	0.53	-0.9
1,354,547	-		CCNA_01227	0.53	-0.1
1,354,560	+		CCNA_01227	0.54	-0.6
1,354,560	+		CCNA_01227	0.54	+0.2
1,354,563	-		CCNA_01227	0.54	-1.7
1,354,568	-		CCNA_01227	0.55	+1.0
1,354,568	-		CCNA_01227	0.55	-0.7
1,354,568	-		CCNA_01227	0.55	-0.5
1,354,570	+		CCNA_01227	0.55	-0.7
1,354,692	+		CCNA_01227	0.67	+0.6
1,354,707	+		CCNA_01227	0.68	+0.2
1,354,707	+		CCNA_01227	0.68	+2.8
1,354,714	+		CCNA_01227	0.69	-1.0
1,354,714	+		CCNA_01227	0.69	+1.3
1,354,714	+		CCNA_01227	0.69	-0.4
1,354,714	+		CCNA_01227	0.69	-0.6
1,354,714	+		CCNA_01227	0.69	-1.0
1,354,714	+		CCNA_01227	0.69	+0.6
1,354,724	+		CCNA_01227	0.70	-0.8
1,354,724	+		CCNA_01227	0.70	+0.5
1,354,732	-		CCNA_01227	0.70	+1.4
1,354,753	+		CCNA_01227	0.72	-0.9
1,354,758	+		CCNA_01227	0.73	-0.1
1,354,758	+		CCNA_01227	0.73	+0.2
1,354,773	-		CCNA_01227	0.74	-0.7
1,354,780	+		CCNA_01227	0.75	-0.6