Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1584

Experiment: BG11 with Chlorite 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chlorite 1.25 mM
1,648,214	+				-0.6
1,648,234	+				-0.8
1,648,234	-				-0.5
1,648,250	-				+0.5
1,648,316	-		Synpcc7942_1583	0.20	-0.2
1,648,346	-		Synpcc7942_1583	0.25	-0.6
1,648,350	+		Synpcc7942_1583	0.26	-2.0
1,648,385	+		Synpcc7942_1583	0.33	-0.8
1,648,427	-		Synpcc7942_1583	0.40	+1.5
1,648,454	-		Synpcc7942_1583	0.45	-0.7
1,648,494	-		Synpcc7942_1583	0.53	-2.5
1,648,494	-		Synpcc7942_1583	0.53	-0.6
1,648,504	+		Synpcc7942_1583	0.55	-1.1
1,648,528	+		Synpcc7942_1583	0.59	-0.6
1,648,576	-		Synpcc7942_1583	0.68	-0.1
1,648,594	+		Synpcc7942_1583	0.72	-0.9
1,648,594	+		Synpcc7942_1583	0.72	-0.1
1,648,594	+		Synpcc7942_1583	0.72	-1.2
1,648,602	-		Synpcc7942_1583	0.73	-1.1
1,648,613	+		Synpcc7942_1583	0.75	+0.1
1,648,614	-		Synpcc7942_1583	0.75	+1.4
1,648,624	+		Synpcc7942_1583	0.77	-0.8
1,648,624	+				-1.1
1,648,624	+		Synpcc7942_1583	0.77	-1.6
1,648,630	+		Synpcc7942_1583	0.78	+0.5
1,648,632	-		Synpcc7942_1583	0.79	+0.2
1,648,679	+		Synpcc7942_1583	0.87	-1.1
1,648,683	-				-2.0
1,648,692	-				-0.7
1,648,735	+				-0.8
1,648,740	+				-2.4
1,648,740	+				-2.9
1,648,748	-				+0.1
1,648,810	+				-1.3
1,648,820	-				-1.8
1,648,878	-		Synpcc7942_1584	0.13	-3.7
1,648,889	+		Synpcc7942_1584	0.14	-1.8
1,648,897	+		Synpcc7942_1584	0.15	-1.3
1,648,901	+		Synpcc7942_1584	0.15	-1.8
1,648,905	-		Synpcc7942_1584	0.15	-1.4
1,648,921	-		Synpcc7942_1584	0.16	-3.3
1,648,934	-		Synpcc7942_1584	0.17	-1.8
1,648,959	-		Synpcc7942_1584	0.19	-0.1
1,649,002	-		Synpcc7942_1584	0.22	-2.5
1,649,070	-		Synpcc7942_1584	0.26	-0.6
1,649,119	-		Synpcc7942_1584	0.30	-1.1
1,649,129	+		Synpcc7942_1584	0.30	-1.9
1,649,153	+		Synpcc7942_1584	0.32	-1.1
1,649,153	+				-1.2
1,649,153	+		Synpcc7942_1584	0.32	-2.2
1,649,161	-		Synpcc7942_1584	0.32	-2.4
1,649,161	-		Synpcc7942_1584	0.32	-0.6
1,649,161	-		Synpcc7942_1584	0.32	-3.3
1,649,169	-		Synpcc7942_1584	0.33	-3.4
1,649,177	+		Synpcc7942_1584	0.33	-3.0
1,649,177	+		Synpcc7942_1584	0.33	-0.5
1,649,225	+		Synpcc7942_1584	0.37	-0.9
1,649,225	+		Synpcc7942_1584	0.37	-1.5
1,649,233	-		Synpcc7942_1584	0.37	-3.2
1,649,234	-		Synpcc7942_1584	0.37	-1.4
1,649,245	+		Synpcc7942_1584	0.38	-1.7
1,649,254	-		Synpcc7942_1584	0.39	-1.4
1,649,263	-		Synpcc7942_1584	0.39	-0.5
1,649,268	-		Synpcc7942_1584	0.40	-2.0
1,649,289	-		Synpcc7942_1584	0.41	-1.2
1,649,310	-		Synpcc7942_1584	0.42	-1.9
1,649,356	+		Synpcc7942_1584	0.46	-0.6
1,649,363	+		Synpcc7942_1584	0.46	-2.8
1,649,364	-		Synpcc7942_1584	0.46	-1.1
1,649,371	-		Synpcc7942_1584	0.47	-2.9
1,649,397	+		Synpcc7942_1584	0.48	-1.8
1,649,397	+		Synpcc7942_1584	0.48	-2.1
1,649,399	+		Synpcc7942_1584	0.48	-2.3
1,649,440	-		Synpcc7942_1584	0.51	-1.8
1,649,472	+		Synpcc7942_1584	0.53	-2.4
1,649,477	+				-0.6
1,649,477	+		Synpcc7942_1584	0.54	-1.8
1,649,480	-		Synpcc7942_1584	0.54	-2.3
1,649,490	+		Synpcc7942_1584	0.55	-0.9
1,649,490	+		Synpcc7942_1584	0.55	-3.3
1,649,498	-		Synpcc7942_1584	0.55	-2.6
1,649,498	-		Synpcc7942_1584	0.55	-0.6
1,649,564	-		Synpcc7942_1584	0.60	-1.5
1,649,566	+		Synpcc7942_1584	0.60	-0.9
1,649,600	+				-0.6
1,649,646	+		Synpcc7942_1584	0.65	-2.1
1,649,661	-		Synpcc7942_1584	0.66	-2.8
1,649,700	-		Synpcc7942_1584	0.69	-1.7
1,649,700	-		Synpcc7942_1584	0.69	-1.9
1,649,704	+				-1.1
1,649,741	+		Synpcc7942_1584	0.72	-1.5
1,649,741	+		Synpcc7942_1584	0.72	-1.0
1,649,749	-		Synpcc7942_1584	0.72	-1.6
1,649,756	+		Synpcc7942_1584	0.73	-2.2
1,649,757	-		Synpcc7942_1584	0.73	-1.2
1,649,795	+		Synpcc7942_1584	0.75	-3.1
1,649,795	+		Synpcc7942_1584	0.75	-0.4
1,649,796	+		Synpcc7942_1584	0.75	-1.2
1,649,803	-		Synpcc7942_1584	0.76	-2.1
1,649,831	+		Synpcc7942_1584	0.78	-1.2
1,649,849	-		Synpcc7942_1584	0.79	-1.9
1,649,860	-		Synpcc7942_1584	0.80	-2.0
1,649,865	-		Synpcc7942_1584	0.80	-0.4
1,649,888	+		Synpcc7942_1584	0.82	-1.6
1,649,914	+		Synpcc7942_1584	0.83	-0.8
1,649,991	+		Synpcc7942_1584	0.89	-0.5
1,650,013	+				-1.8
1,650,021	-				-2.5
1,650,026	-				-0.8
1,650,058	+				-2.2
1,650,071	-				-2.0
1,650,141	-				-2.0
1,650,152	-				-0.2
1,650,157	+				+0.9
1,650,165	+				-0.9
1,650,167	+				-1.8
1,650,173	-				+0.3
1,650,173	-				+0.9
1,650,274	-				-0.4
1,650,288	-		Synpcc7942_1585	0.11	-0.3
1,650,319	-		Synpcc7942_1585	0.15	+0.7
1,650,319	-		Synpcc7942_1585	0.15	-0.9
1,650,330	-		Synpcc7942_1585	0.16	-0.0
1,650,353	+		Synpcc7942_1585	0.19	-0.6
1,650,370	+		Synpcc7942_1585	0.22	+0.2
1,650,375	+		Synpcc7942_1585	0.22	-2.1
1,650,378	-		Synpcc7942_1585	0.23	-1.8
1,650,378	-		Synpcc7942_1585	0.23	-0.1
1,650,378	-		Synpcc7942_1585	0.23	-0.9
1,650,387	+		Synpcc7942_1585	0.24	+0.8
1,650,395	-		Synpcc7942_1585	0.25	-0.2
1,650,395	-		Synpcc7942_1585	0.25	-1.5
1,650,395	-		Synpcc7942_1585	0.25	-0.4
1,650,407	-		Synpcc7942_1585	0.26	+0.5
1,650,434	+		Synpcc7942_1585	0.30	-0.7
1,650,434	+		Synpcc7942_1585	0.30	+0.6
1,650,442	-		Synpcc7942_1585	0.31	-0.6
1,650,442	-		Synpcc7942_1585	0.31	+0.2
1,650,495	-		Synpcc7942_1585	0.37	+0.8
1,650,498	-		Synpcc7942_1585	0.38	-0.1
1,650,501	+		Synpcc7942_1585	0.38	-1.6
1,650,508	-		Synpcc7942_1585	0.39	+1.9
1,650,509	-		Synpcc7942_1585	0.39	+0.0
1,650,531	-		Synpcc7942_1585	0.42	+0.8
1,650,547	+		Synpcc7942_1585	0.44	+1.1
1,650,547	+		Synpcc7942_1585	0.44	-0.6
1,650,552	+		Synpcc7942_1585	0.45	+1.2
1,650,601	+		Synpcc7942_1585	0.51	+0.1
1,650,616	+		Synpcc7942_1585	0.53	+0.4
1,650,619	+		Synpcc7942_1585	0.53	+1.2
1,650,626	+		Synpcc7942_1585	0.54	-0.6
1,650,626	+		Synpcc7942_1585	0.54	-0.9
1,650,670	+		Synpcc7942_1585	0.60	-0.2
1,650,700	+		Synpcc7942_1585	0.63	-1.4
1,650,716	+		Synpcc7942_1585	0.66	+0.1
1,650,765	+		Synpcc7942_1585	0.72	+1.9
1,650,765	+		Synpcc7942_1585	0.72	-1.2
1,650,773	-		Synpcc7942_1585	0.73	-0.7
1,650,803	+		Synpcc7942_1585	0.77	-1.1
1,650,803	-		Synpcc7942_1585	0.77	+0.2
1,650,809	+		Synpcc7942_1585	0.77	+0.4
1,650,883	-		Synpcc7942_1585	0.87	+0.5
1,650,883	-		Synpcc7942_1585	0.87	-0.5
1,650,883	-		Synpcc7942_1585	0.87	-1.4
1,650,906	-		Synpcc7942_1585	0.90	+0.7
1,650,911	+				-0.7
1,650,911	+				+0.3
1,650,923	+				-0.7
1,650,933	+				+0.4
1,650,942	-				+1.2
1,650,942	-				+0.9
1,650,996	-				-0.8
1,651,044	+				+0.1
1,651,077	-				-0.9
1,651,077	-				-1.1
1,651,077	-				+0.5
1,651,077	-				+0.6
1,651,089	-				+0.3
1,651,095	-				+0.1
1,651,102	-				-1.1
1,651,117	+				-0.2
1,651,156	-				-2.5