Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02454

Experiment: PYE with CHIR-090 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 1 ug/mL
2,591,995	+				-0.7
2,592,002	+				-0.1
2,592,003	-				-0.5
2,592,007	+				-0.0
2,592,010	-				-0.6
2,592,020	+				-0.7
2,592,070	+		CCNA_02452	0.18	+0.6
2,592,078	-		CCNA_02452	0.19	+1.2
2,592,092	+		CCNA_02452	0.22	-0.5
2,592,093	-		CCNA_02452	0.22	+1.1
2,592,149	+		CCNA_02452	0.34	+0.5
2,592,157	-		CCNA_02452	0.35	-2.5
2,592,172	-		CCNA_02452	0.38	-1.1
2,592,195	+		CCNA_02452	0.43	-1.3
2,592,206	-		CCNA_02452	0.45	-0.9
2,592,219	-		CCNA_02452	0.48	+1.1
2,592,277	+		CCNA_02452	0.59	+0.1
2,592,306	+		CCNA_02452	0.65	-0.2
2,592,306	+		CCNA_02452	0.65	-0.5
2,592,314	-		CCNA_02452	0.67	+0.4
2,592,345	-		CCNA_02452	0.73	-0.4
2,592,389	+		CCNA_02452	0.82	+0.5
2,592,397	-		CCNA_02452	0.84	+1.1
2,592,460	+				-0.1
2,592,462	+				-0.6
2,592,470	-				-1.1
2,592,472	+				-0.4
2,592,480	-				-0.5
2,592,503	+				-0.8
2,592,512	-				-2.1
2,592,537	+				-0.9
2,592,562	+		CCNA_02453	0.14	-1.1
2,592,572	+		CCNA_02453	0.16	-0.2
2,592,624	-		CCNA_02453	0.27	-0.3
2,592,631	+		CCNA_02453	0.28	+0.4
2,592,692	-				-0.4
2,592,709	-		CCNA_02453	0.44	+2.3
2,592,713	-		CCNA_02453	0.44	-0.3
2,592,736	+		CCNA_02453	0.49	+2.8
2,592,756	+		CCNA_02453	0.53	-0.6
2,592,918	+		CCNA_02453	0.85	+1.7
2,592,921	-		CCNA_02453	0.86	+1.2
2,592,944	-				+1.1
2,592,982	-				-0.8
2,593,018	+				-0.2
2,593,064	+				-0.6
2,593,064	+				+0.2
2,593,064	+				+0.2
2,593,073	-				+0.6
2,593,073	-				+0.6
2,593,078	-				-0.8
2,593,109	-				-0.8
2,593,110	+				-0.8
2,593,110	+				-1.3
2,593,276	+				-1.7
2,593,276	+				-1.0
2,593,279	-				+0.3
2,593,284	-				+0.6
2,593,284	-				-1.3
2,593,300	+				-0.2
2,593,300	+				-0.8
2,593,308	-				+0.5
2,593,315	+				-0.0
2,593,334	+				+1.7
2,593,342	-		CCNA_02454	0.10	+0.7
2,593,342	-		CCNA_02454	0.10	-1.9
2,593,342	-		CCNA_02454	0.10	+1.8
2,593,342	-		CCNA_02454	0.10	+0.5
2,593,342	-		CCNA_02454	0.10	-0.2
2,593,342	-		CCNA_02454	0.10	-1.6
2,593,342	-		CCNA_02454	0.10	+0.8
2,593,342	-		CCNA_02454	0.10	-0.7
2,593,342	-		CCNA_02454	0.10	+0.4
2,593,390	-		CCNA_02454	0.12	-0.2
2,593,431	-		CCNA_02454	0.13	+0.2
2,593,442	+		CCNA_02454	0.13	+0.0
2,593,462	+		CCNA_02454	0.14	+0.5
2,593,482	+		CCNA_02454	0.14	-2.3
2,593,510	-		CCNA_02454	0.15	+0.3
2,593,640	-		CCNA_02454	0.19	+0.8
2,593,671	-		CCNA_02454	0.19	-0.1
2,593,691	-		CCNA_02454	0.20	-0.7
2,593,780	+		CCNA_02454	0.22	+0.1
2,593,799	+		CCNA_02454	0.23	-2.1
2,593,807	-		CCNA_02454	0.23	-0.6
2,593,831	-		CCNA_02454	0.24	-0.4
2,593,844	+		CCNA_02454	0.24	+0.5
2,593,844	+		CCNA_02454	0.24	+0.8
2,593,847	-		CCNA_02454	0.24	+0.7
2,593,852	-		CCNA_02454	0.24	-0.2
2,593,852	-		CCNA_02454	0.24	+0.3
2,593,852	-		CCNA_02454	0.24	+0.3
2,593,873	-		CCNA_02454	0.25	-1.8
2,593,876	+		CCNA_02454	0.25	-0.2
2,593,876	+		CCNA_02454	0.25	+0.1
2,593,876	+		CCNA_02454	0.25	+0.5
2,593,884	-		CCNA_02454	0.25	-1.6
2,593,884	-		CCNA_02454	0.25	-0.6
2,593,884	-		CCNA_02454	0.25	-1.1
2,593,884	-		CCNA_02454	0.25	-0.7
2,593,884	-		CCNA_02454	0.25	+1.3
2,593,885	-		CCNA_02454	0.25	+0.8
2,593,904	+		CCNA_02454	0.26	-0.5
2,593,912	+		CCNA_02454	0.26	-0.3
2,594,045	-		CCNA_02454	0.30	-0.9
2,594,101	+		CCNA_02454	0.31	+0.6
2,594,109	-		CCNA_02454	0.32	+0.2
2,594,109	-		CCNA_02454	0.32	+0.1
2,594,109	-		CCNA_02454	0.32	+0.0
2,594,132	+		CCNA_02454	0.32	+0.3
2,594,178	+		CCNA_02454	0.34	+0.2
2,594,210	+		CCNA_02454	0.34	+0.4
2,594,234	-		CCNA_02454	0.35	+0.3
2,594,234	-		CCNA_02454	0.35	+0.5
2,594,322	+		CCNA_02454	0.38	-1.3
2,594,327	+		CCNA_02454	0.38	-1.1
2,594,386	-				+0.2
2,594,386	-		CCNA_02454	0.39	-2.8
2,594,418	-		CCNA_02454	0.40	+0.2
2,594,418	-		CCNA_02454	0.40	+1.5
2,594,418	-		CCNA_02454	0.40	-0.1
2,594,441	-		CCNA_02454	0.41	-1.5
2,594,443	-		CCNA_02454	0.41	-0.5
2,594,469	+		CCNA_02454	0.42	-1.1
2,594,477	-		CCNA_02454	0.42	-0.5
2,594,491	+		CCNA_02454	0.42	-0.0
2,594,491	+		CCNA_02454	0.42	-0.0
2,594,491	+		CCNA_02454	0.42	-1.1
2,594,491	+		CCNA_02454	0.42	-0.5
2,594,491	+		CCNA_02454	0.42	+0.9
2,594,499	-		CCNA_02454	0.43	+0.6
2,594,499	-		CCNA_02454	0.43	-0.5
2,594,499	-		CCNA_02454	0.43	-0.4
2,594,515	-		CCNA_02454	0.43	-0.3
2,594,535	-		CCNA_02454	0.44	+0.8
2,594,567	+		CCNA_02454	0.44	-0.4
2,594,601	+		CCNA_02454	0.45	-0.7
2,594,609	-		CCNA_02454	0.46	+1.6
2,594,626	-		CCNA_02454	0.46	-1.7
2,594,653	+		CCNA_02454	0.47	-0.3
2,594,653	+		CCNA_02454	0.47	+2.0
2,594,661	-		CCNA_02454	0.47	-0.2
2,594,661	-		CCNA_02454	0.47	-0.7
2,594,661	-		CCNA_02454	0.47	+0.8
2,594,687	-		CCNA_02454	0.48	-0.4
2,594,702	+		CCNA_02454	0.48	-0.2
2,594,705	-		CCNA_02454	0.48	+0.2
2,594,710	-		CCNA_02454	0.48	-0.1
2,594,829	-		CCNA_02454	0.52	+0.2
2,594,857	+		CCNA_02454	0.53	-0.7
2,594,872	+		CCNA_02454	0.53	+0.6
2,594,913	-		CCNA_02454	0.54	+0.9
2,594,966	+		CCNA_02454	0.56	-1.1
2,594,967	+		CCNA_02454	0.56	-0.2
2,594,972	-		CCNA_02454	0.56	-1.1
2,594,993	-		CCNA_02454	0.56	+0.3
2,594,997	-		CCNA_02454	0.56	+1.3
2,595,029	-		CCNA_02454	0.57	+0.5
2,595,032	-		CCNA_02454	0.57	-2.7
2,595,044	+		CCNA_02454	0.58	+2.8
2,595,062	+		CCNA_02454	0.58	+0.8
2,595,062	+		CCNA_02454	0.58	+0.2
2,595,070	-		CCNA_02454	0.58	-0.1
2,595,070	-		CCNA_02454	0.58	+1.0
2,595,079	-		CCNA_02454	0.59	-1.5
2,595,133	+		CCNA_02454	0.60	-0.3
2,595,146	+		CCNA_02454	0.61	-0.5
2,595,154	+		CCNA_02454	0.61	-0.7
2,595,160	-		CCNA_02454	0.61	+0.4
2,595,160	-		CCNA_02454	0.61	+0.8
2,595,173	-		CCNA_02454	0.61	-0.6
2,595,177	-		CCNA_02454	0.61	-1.7
2,595,194	+		CCNA_02454	0.62	+0.1
2,595,224	+		CCNA_02454	0.63	-0.3
2,595,232	-		CCNA_02454	0.63	-0.1
2,595,244	+		CCNA_02454	0.63	+1.2
2,595,244	+		CCNA_02454	0.63	-1.9
2,595,244	+		CCNA_02454	0.63	-1.8
2,595,244	+				+0.2
2,595,249	+		CCNA_02454	0.63	+0.8
2,595,252	-		CCNA_02454	0.64	-0.2
2,595,279	+		CCNA_02454	0.64	+0.5
2,595,326	+		CCNA_02454	0.66	-0.6
2,595,360	-		CCNA_02454	0.67	-0.3
2,595,365	-		CCNA_02454	0.67	-0.2
2,595,400	+		CCNA_02454	0.68	-0.7
2,595,439	+		CCNA_02454	0.69	-1.4
2,595,480	-		CCNA_02454	0.70	-0.2
2,595,493	-		CCNA_02454	0.70	-0.3
2,595,493	-		CCNA_02454	0.70	-0.8
2,595,527	+		CCNA_02454	0.71	+0.7
2,595,535	-		CCNA_02454	0.71	+0.5
2,595,535	-		CCNA_02454	0.71	+0.3
2,595,537	+		CCNA_02454	0.72	-1.3
2,595,612	+		CCNA_02454	0.74	-1.1
2,595,612	+		CCNA_02454	0.74	-0.1
2,595,612	+		CCNA_02454	0.74	-0.9
2,595,612	-		CCNA_02454	0.74	+0.1
2,595,620	-		CCNA_02454	0.74	-0.7
2,595,638	+		CCNA_02454	0.74	-0.1
2,595,646	-		CCNA_02454	0.75	+0.4
2,595,668	-		CCNA_02454	0.75	+0.8
2,595,681	-		CCNA_02454	0.76	-0.5
2,595,729	-		CCNA_02454	0.77	-0.5
2,595,817	-		CCNA_02454	0.79	-0.9
2,595,854	-		CCNA_02454	0.80	+0.7
2,595,854	-		CCNA_02454	0.80	-1.2
2,595,854	-		CCNA_02454	0.80	-0.2
2,595,854	-		CCNA_02454	0.80	+0.1
2,595,854	-		CCNA_02454	0.80	-0.0
2,595,868	+		CCNA_02454	0.81	-0.8
2,595,899	-		CCNA_02454	0.82	+0.8
2,595,901	+		CCNA_02454	0.82	-0.9
2,595,944	-		CCNA_02454	0.83	+0.1
2,595,946	+		CCNA_02454	0.83	-0.4
2,595,946	+		CCNA_02454	0.83	+0.9
2,595,954	-		CCNA_02454	0.83	+0.0
2,595,959	-		CCNA_02454	0.83	+0.9
2,595,965	+		CCNA_02454	0.83	-0.0
2,595,988	+		CCNA_02454	0.84	+1.0
2,596,017	-		CCNA_02454	0.85	+1.0
2,596,095	+		CCNA_02454	0.87	+0.6
2,596,105	-		CCNA_02454	0.87	+1.1
2,596,170	-				+0.8
2,596,170	-		CCNA_02454	0.89	-0.0
2,596,176	+				-1.3
2,596,186	-		CCNA_02454	0.90	+0.9
2,596,219	+				-0.7
2,596,219	+				-0.2
2,596,249	+				+2.4
2,596,262	-				-0.5
2,596,294	-				-0.7
2,596,295	-				-0.0
2,596,394	+				-0.4
2,596,402	-				+0.2
2,596,402	-				-0.6
2,596,438	+				-0.4
2,596,459	+				-1.2
2,596,488	-				-0.9
2,596,500	-				-0.7
2,596,561	+				+1.1
2,596,569	-				-1.1
2,596,569	-				+0.3
2,596,569	-				-1.4
2,596,606	+				-1.1
2,596,650	-				-0.8
2,596,661	-				-0.3
2,596,700	-				+0.1
2,596,701	+				+0.3
2,596,723	+				-1.5
2,596,743	+				+0.7
2,596,768	+		CCNA_02455	0.14	-0.5
2,596,785	-		CCNA_02455	0.17	+0.7
2,596,799	+		CCNA_02455	0.19	-0.7
2,596,829	+		CCNA_02455	0.24	-0.3
2,596,837	-		CCNA_02455	0.26	-0.5
2,596,897	+		CCNA_02455	0.36	-1.3
2,596,897	-		CCNA_02455	0.36	+2.8
2,596,897	-		CCNA_02455	0.36	-0.3
2,596,931	+		CCNA_02455	0.42	-2.2
2,596,978	+		CCNA_02455	0.50	-2.3
2,596,996	-		CCNA_02455	0.53	+0.1
2,596,996	-		CCNA_02455	0.53	-0.1
2,597,001	-		CCNA_02455	0.54	-1.0
2,597,010	+		CCNA_02455	0.56	-1.0
2,597,010	+		CCNA_02455	0.56	-0.4
2,597,055	-		CCNA_02455	0.64	-0.5
2,597,055	-		CCNA_02455	0.64	+0.6
2,597,060	-		CCNA_02455	0.64	-0.1
2,597,064	-		CCNA_02455	0.65	-2.4
2,597,122	-		CCNA_02455	0.75	-0.3
2,597,127	-		CCNA_02455	0.76	+0.5
2,597,143	-		CCNA_02455	0.79	+1.8
2,597,186	+		CCNA_02455	0.86	-1.6
2,597,193	+		CCNA_02455	0.88	-0.9
2,597,250	-				+1.7
2,597,314	-				-0.2
2,597,340	+				+0.4
2,597,353	-				+1.3
2,597,369	+				+1.0
2,597,403	-				+0.3
2,597,444	+				-0.6
2,597,451	+				+1.5
2,597,452	-				+0.0
2,597,452	-				+0.9
2,597,452	-				+0.5
2,597,452	-				-0.1
2,597,452	-				-0.3
2,597,452	-				+1.4
2,597,452	-				+2.2
2,597,452	-				+0.9
2,597,452	-				+0.0
2,597,468	-				+0.4
2,597,468	-				+0.4
2,597,476	-				+0.6
2,597,492	+				-0.1
2,597,500	-				-2.6
2,597,507	-				+0.4
2,597,508	+				+0.6
2,597,514	+				-0.4
2,597,515	+				-0.4
2,597,522	+				+1.8
2,597,523	-				-0.2
2,597,523	-				-0.3
2,597,523	-				+0.4
2,597,523	-				-0.5
2,597,526	+				+0.2
2,597,528	-				+0.0
2,597,553	-				+0.2