Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01864

Experiment: PYE with CHIR-090 1 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 1 ug/mL
1,997,746	-		CCNA_01863	0.38	-2.4
1,997,807	+		CCNA_01863	0.43	+1.2
1,997,817	+		CCNA_01863	0.43	-0.5
1,997,825	-		CCNA_01863	0.44	+0.1
1,997,831	+		CCNA_01863	0.44	+0.1
1,997,831	+		CCNA_01863	0.44	-1.0
1,997,839	-		CCNA_01863	0.45	+0.6
1,997,839	-		CCNA_01863	0.45	-1.6
1,997,839	-		CCNA_01863	0.45	-0.3
1,997,839	-		CCNA_01863	0.45	+1.3
1,997,864	-		CCNA_01863	0.47	+1.3
1,997,889	+		CCNA_01863	0.48	-3.5
1,997,914	+		CCNA_01863	0.50	-0.9
1,997,914	+		CCNA_01863	0.50	-1.5
1,997,916	-		CCNA_01863	0.50	-0.2
1,997,919	+		CCNA_01863	0.50	-0.1
1,997,922	-		CCNA_01863	0.51	+0.5
1,997,922	-		CCNA_01863	0.51	+0.2
1,997,922	-		CCNA_01863	0.51	+0.4
1,997,922	-		CCNA_01863	0.51	+0.9
1,997,922	-		CCNA_01863	0.51	+1.0
1,997,924	+		CCNA_01863	0.51	+0.4
1,997,927	-		CCNA_01863	0.51	+0.0
1,997,990	+		CCNA_01863	0.55	-0.0
1,997,998	-		CCNA_01863	0.56	+0.9
1,998,011	+		CCNA_01863	0.57	-0.0
1,998,011	+		CCNA_01863	0.57	-0.2
1,998,053	-		CCNA_01863	0.60	-1.6
1,998,053	-		CCNA_01863	0.60	+0.5
1,998,113	+		CCNA_01863	0.64	-2.4
1,998,118	+		CCNA_01863	0.64	-0.9
1,998,139	+		CCNA_01863	0.66	+1.9
1,998,139	+		CCNA_01863	0.66	+0.7
1,998,139	+		CCNA_01863	0.66	+0.1
1,998,221	-		CCNA_01863	0.71	-0.6
1,998,328	-		CCNA_01863	0.79	+0.9
1,998,328	-		CCNA_01863	0.79	+0.7
1,998,361	+		CCNA_01863	0.81	+1.1
1,998,380	-		CCNA_01863	0.83	+1.3
1,998,438	-		CCNA_01863	0.87	-0.5
1,998,443	-		CCNA_01863	0.87	-1.5
1,998,543	+				+1.9
1,998,553	+				-0.2
1,998,561	-				-0.8
1,998,587	+				-0.4
1,998,595	-				+0.3
1,998,595	-				-0.5
1,998,796	+		CCNA_01864	0.11	+0.6
1,998,888	+		CCNA_01864	0.26	+2.3
1,998,888	+		CCNA_01864	0.26	+0.3
1,998,990	+		CCNA_01864	0.42	-1.5
1,999,060	+		CCNA_01864	0.54	+1.9
1,999,101	+		CCNA_01864	0.60	-0.1
1,999,132	+		CCNA_01864	0.65	-2.0
1,999,132	+		CCNA_01864	0.65	-0.4
1,999,321	+				+1.3
1,999,331	+				+1.5
1,999,344	+				+2.3
1,999,352	-				+1.8
1,999,352	-				-1.5
1,999,428	+				-1.2
1,999,428	+				-1.4
1,999,436	-				-2.5
1,999,451	+				-0.5
1,999,504	+				+0.1
1,999,532	+				+1.2
1,999,540	-				-1.3
1,999,598	-		CCNA_01865	0.15	-1.1
1,999,627	-		CCNA_01865	0.17	-0.4
1,999,651	+		CCNA_01865	0.20	-1.5
1,999,651	+		CCNA_01865	0.20	+2.0
1,999,652	-		CCNA_01865	0.20	-0.4
1,999,659	-		CCNA_01865	0.20	-1.5
1,999,659	-		CCNA_01865	0.20	-0.1
1,999,665	+		CCNA_01865	0.21	-0.1
1,999,670	+		CCNA_01865	0.21	-0.7
1,999,673	-		CCNA_01865	0.22	-0.3
1,999,675	+		CCNA_01865	0.22	-0.2
1,999,683	-		CCNA_01865	0.22	-0.1
1,999,683	-		CCNA_01865	0.22	-1.4
1,999,699	+		CCNA_01865	0.24	+1.2
1,999,744	+		CCNA_01865	0.28	+2.9
1,999,758	+		CCNA_01865	0.29	+1.2
1,999,758	+		CCNA_01865	0.29	+0.2
1,999,773	+		CCNA_01865	0.31	+0.4
1,999,781	-		CCNA_01865	0.31	-0.7
1,999,781	-		CCNA_01865	0.31	-1.6
1,999,783	+		CCNA_01865	0.32	-0.5
1,999,783	+		CCNA_01865	0.32	+1.2
1,999,791	-		CCNA_01865	0.32	+0.6
1,999,850	+		CCNA_01865	0.38	-0.0
1,999,858	-		CCNA_01865	0.39	+0.5
1,999,858	-		CCNA_01865	0.39	-1.1
1,999,858	-		CCNA_01865	0.39	-0.0
1,999,858	-		CCNA_01865	0.39	-0.2
1,999,860	+				+2.2
1,999,860	+		CCNA_01865	0.39	+0.3
1,999,863	-		CCNA_01865	0.39	-2.1
1,999,863	-		CCNA_01865	0.39	-0.8
1,999,868	-		CCNA_01865	0.39	+0.9
1,999,868	-		CCNA_01865	0.39	-0.3
1,999,868	-		CCNA_01865	0.39	-0.8
1,999,868	-		CCNA_01865	0.39	-0.6
1,999,874	-		CCNA_01865	0.40	-0.4
1,999,899	-		CCNA_01865	0.42	-0.2
1,999,926	-		CCNA_01865	0.45	+0.6
1,999,948	+		CCNA_01865	0.47	+0.1
1,999,948	+		CCNA_01865	0.47	+0.6
1,999,956	-		CCNA_01865	0.48	-0.0
1,999,961	-		CCNA_01865	0.48	-0.1
1,999,989	+		CCNA_01865	0.51	-1.3
2,000,034	-		CCNA_01865	0.55	-0.5
2,000,050	-		CCNA_01865	0.56	-0.9
2,000,081	-		CCNA_01865	0.59	-1.0
2,000,087	+		CCNA_01865	0.60	+1.2
2,000,087	+		CCNA_01865	0.60	-0.3
2,000,087	+		CCNA_01865	0.60	+1.0
2,000,087	+		CCNA_01865	0.60	+0.1
2,000,092	+		CCNA_01865	0.60	+0.5
2,000,092	+		CCNA_01865	0.60	-0.6
2,000,092	+		CCNA_01865	0.60	+1.2
2,000,092	+		CCNA_01865	0.60	-1.2
2,000,092	+		CCNA_01865	0.60	+0.3
2,000,092	+		CCNA_01865	0.60	-0.8
2,000,092	+		CCNA_01865	0.60	+0.2
2,000,092	+		CCNA_01865	0.60	-0.2
2,000,095	-		CCNA_01865	0.60	-0.8
2,000,100	-		CCNA_01865	0.61	+2.3
2,000,100	-		CCNA_01865	0.61	-0.4
2,000,100	-		CCNA_01865	0.61	-1.4
2,000,100	-		CCNA_01865	0.61	-0.0
2,000,100	-		CCNA_01865	0.61	-0.3
2,000,100	-		CCNA_01865	0.61	+0.3
2,000,155	+		CCNA_01865	0.66	-1.1
2,000,204	+		CCNA_01865	0.70	-0.4
2,000,212	-		CCNA_01865	0.71	+1.9
2,000,212	-		CCNA_01865	0.71	-0.6
2,000,212	-		CCNA_01865	0.71	+0.3
2,000,236	-		CCNA_01865	0.73	-0.4
2,000,254	+				+0.6
2,000,260	-		CCNA_01865	0.75	-0.2
2,000,261	-		CCNA_01865	0.76	+1.3
2,000,302	+				-0.4
2,000,302	+		CCNA_01865	0.79	+1.2
2,000,325	-		CCNA_01865	0.81	-1.7
2,000,325	-		CCNA_01865	0.81	+1.3