Experiment: Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS02795 and BWI76_RS02800 are separated by 180 nucleotides BWI76_RS02800 and BWI76_RS02805 are separated by 10 nucleotides
BWI76_RS02795: BWI76_RS02795 - periplasmic binding protein/LacI transcriptional regulator, at 570,155 to 571,111
_RS02795
BWI76_RS02800: BWI76_RS02800 - ABC transporter, at 571,292 to 572,794
_RS02800
BWI76_RS02805: BWI76_RS02805 - sugar ABC transporter permease, at 572,805 to 573,830
_RS02805
Position (kb) 571
572
573 Strain fitness (log2 ratio) -1
0
1
2 at 570.322 kb on + strand, within BWI76_RS02795 at 570.440 kb on + strand, within BWI76_RS02795 at 570.440 kb on + strand, within BWI76_RS02795 at 570.536 kb on - strand, within BWI76_RS02795 at 570.577 kb on + strand, within BWI76_RS02795 at 570.619 kb on + strand, within BWI76_RS02795 at 570.747 kb on - strand, within BWI76_RS02795 at 570.808 kb on - strand, within BWI76_RS02795 at 570.937 kb on + strand, within BWI76_RS02795 at 570.945 kb on - strand, within BWI76_RS02795 at 570.946 kb on - strand, within BWI76_RS02795 at 570.946 kb on - strand, within BWI76_RS02795 at 571.068 kb on - strand at 571.171 kb on - strand at 571.189 kb on + strand at 571.271 kb on + strand at 571.271 kb on + strand at 571.279 kb on - strand at 571.279 kb on - strand at 571.279 kb on - strand at 571.311 kb on + strand at 571.430 kb on + strand at 571.767 kb on + strand, within BWI76_RS02800 at 571.814 kb on + strand, within BWI76_RS02800 at 571.912 kb on + strand, within BWI76_RS02800 at 571.912 kb on + strand, within BWI76_RS02800 at 572.002 kb on + strand, within BWI76_RS02800 at 572.058 kb on + strand, within BWI76_RS02800 at 572.586 kb on + strand, within BWI76_RS02800 at 572.633 kb on - strand at 572.689 kb on + strand at 572.739 kb on + strand at 572.865 kb on - strand at 573.046 kb on + strand, within BWI76_RS02805 at 573.263 kb on + strand, within BWI76_RS02805 at 573.268 kb on + strand, within BWI76_RS02805 at 573.526 kb on + strand, within BWI76_RS02805 at 573.558 kb on + strand, within BWI76_RS02805
Per-strain Table
Position Strand Gene LocusTag Fraction Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM remove 570,322 + BWI76_RS02795 0.17 +0.1 570,440 + BWI76_RS02795 0.30 -0.9 570,440 + BWI76_RS02795 0.30 +0.0 570,536 - BWI76_RS02795 0.40 +0.2 570,577 + BWI76_RS02795 0.44 -0.0 570,619 + BWI76_RS02795 0.48 -0.7 570,747 - BWI76_RS02795 0.62 +0.0 570,808 - BWI76_RS02795 0.68 -1.1 570,937 + BWI76_RS02795 0.82 -0.6 570,945 - BWI76_RS02795 0.83 -0.6 570,946 - BWI76_RS02795 0.83 -1.7 570,946 - BWI76_RS02795 0.83 -0.4 571,068 - -0.9 571,171 - +0.3 571,189 + -0.7 571,271 + -0.5 571,271 + +1.8 571,279 - +0.2 571,279 - -0.1 571,279 - -0.1 571,311 + +0.2 571,430 + -1.5 571,767 + BWI76_RS02800 0.32 +2.4 571,814 + BWI76_RS02800 0.35 +0.4 571,912 + BWI76_RS02800 0.41 +0.7 571,912 + BWI76_RS02800 0.41 +0.2 572,002 + BWI76_RS02800 0.47 +1.0 572,058 + BWI76_RS02800 0.51 +1.8 572,586 + BWI76_RS02800 0.86 +1.5 572,633 - -0.2 572,689 + +1.2 572,739 + +1.1 572,865 - -0.1 573,046 + BWI76_RS02805 0.23 +0.1 573,263 + BWI76_RS02805 0.45 -1.1 573,268 + BWI76_RS02805 0.45 -1.2 573,526 + BWI76_RS02805 0.70 -0.9 573,558 + BWI76_RS02805 0.73 -0.3
Or see this region's nucleotide sequence