Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2518

Experiment: MoLS4 with L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDVU2517 and rplM are separated by 197 nucleotidesrplM and rpsI are separated by 18 nucleotidesrpsI and aroK-2 are separated by 551 nucleotides DVU2517: DVU2517 - conserved hypothetical protein (TIGR), at 2,630,653 to 2,631,894 DVU2517 DVU2518: rplM - ribosomal protein L13 (TIGR), at 2,632,092 to 2,632,526 rplM DVU2519: rpsI - ribosomal protein S9 (TIGR), at 2,632,545 to 2,632,937 rpsI DVU2521: aroK-2 - shikimate kinase (TIGR), at 2,633,489 to 2,634,031 aroK-2 Position (kb) 2632 2633Strain fitness (log2 ratio) -1 0 1at 2631.121 kb on + strand, within DVU2517at 2631.121 kb on + strand, within DVU2517at 2631.122 kb on - strand, within DVU2517at 2631.179 kb on - strand, within DVU2517at 2631.212 kb on + strand, within DVU2517at 2631.289 kb on - strand, within DVU2517at 2631.308 kb on + strand, within DVU2517at 2631.314 kb on - strand, within DVU2517at 2631.320 kb on + strand, within DVU2517at 2631.350 kb on + strand, within DVU2517at 2631.452 kb on + strand, within DVU2517at 2631.454 kb on + strand, within DVU2517at 2631.542 kb on + strand, within DVU2517at 2631.607 kb on - strand, within DVU2517at 2631.689 kb on + strand, within DVU2517at 2631.711 kb on + strand, within DVU2517at 2631.735 kb on + strand, within DVU2517at 2631.743 kb on + strand, within DVU2517at 2631.751 kb on - strand, within DVU2517at 2631.785 kb on - strandat 2631.950 kb on + strandat 2631.951 kb on - strandat 2631.951 kb on - strandat 2631.982 kb on - strandat 2633.070 kb on + strandat 2633.073 kb on + strandat 2633.180 kb on + strandat 2633.225 kb on - strandat 2633.246 kb on - strandat 2633.281 kb on - strandat 2633.355 kb on - strandat 2633.401 kb on + strandat 2633.437 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 with L-Leucine (N)
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2,631,121 + DVU2517 0.38 -0.1
2,631,121 + DVU2517 0.38 +0.6
2,631,122 - DVU2517 0.38 +0.6
2,631,179 - DVU2517 0.42 -0.1
2,631,212 + DVU2517 0.45 -1.1
2,631,289 - DVU2517 0.51 +0.2
2,631,308 + DVU2517 0.53 -0.5
2,631,314 - DVU2517 0.53 +0.3
2,631,320 + DVU2517 0.54 +0.1
2,631,350 + DVU2517 0.56 -0.0
2,631,452 + DVU2517 0.64 -0.1
2,631,454 + DVU2517 0.64 -0.1
2,631,542 + DVU2517 0.72 -0.0
2,631,607 - DVU2517 0.77 +0.0
2,631,689 + DVU2517 0.83 -0.2
2,631,711 + DVU2517 0.85 +0.3
2,631,735 + DVU2517 0.87 +0.3
2,631,743 + DVU2517 0.88 +0.2
2,631,751 - DVU2517 0.88 -0.4
2,631,785 - +1.3
2,631,950 + +0.1
2,631,951 - -0.3
2,631,951 - -0.1
2,631,982 - -0.3
2,633,070 + +0.6
2,633,073 + +0.0
2,633,180 + -1.6
2,633,225 - -0.3
2,633,246 - -0.3
2,633,281 - +1.3
2,633,355 - -0.1
2,633,401 + +0.0
2,633,437 - +0.3

Or see this region's nucleotide sequence