Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5209

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
3,263,056	+				+0.0
3,263,056	+				-2.8
3,263,057	-				+0.0
3,263,057	-				+0.0
3,263,057	-				+0.0
3,263,096	+				-2.3
3,263,097	-				+0.0
3,263,137	+				-1.8
3,263,191	+				-1.8
3,263,192	-				-0.0
3,263,278	+		Pf1N1B4_2908	0.20	-4.0
3,263,279	-		Pf1N1B4_2908	0.21	-0.0
3,263,279	-				-4.7
3,263,293	+		Pf1N1B4_2908	0.23	-0.0
3,263,366	+		Pf1N1B4_2908	0.33	-0.0
3,263,366	+		Pf1N1B4_2908	0.33	-0.0
3,263,366	+		Pf1N1B4_2908	0.33	-0.0
3,263,366	+		Pf1N1B4_2908	0.33	-0.0
3,263,366	+		Pf1N1B4_2908	0.33	-3.0
3,263,367	-		Pf1N1B4_2908	0.33	-0.0
3,263,367	-		Pf1N1B4_2908	0.33	-0.0
3,263,370	+		Pf1N1B4_2908	0.34	-0.0
3,263,370	+		Pf1N1B4_2908	0.34	-0.0
3,263,370	+		Pf1N1B4_2908	0.34	-0.0
3,263,370	+		Pf1N1B4_2908	0.34	-0.0
3,263,370	+		Pf1N1B4_2908	0.34	-2.3
3,263,370	+		Pf1N1B4_2908	0.34	-1.6
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,371	-		Pf1N1B4_2908	0.34	-0.0
3,263,383	+		Pf1N1B4_2908	0.36	-2.3
3,263,384	-		Pf1N1B4_2908	0.36	-0.0
3,263,523	+				-0.0
3,263,523	+		Pf1N1B4_2908	0.56	-0.0
3,263,523	+		Pf1N1B4_2908	0.56	-2.6
3,263,524	-		Pf1N1B4_2908	0.56	-0.0
3,263,524	-		Pf1N1B4_2908	0.56	-0.0
3,263,524	-		Pf1N1B4_2908	0.56	-0.0
3,263,524	-		Pf1N1B4_2908	0.56	-1.2
3,263,524	-		Pf1N1B4_2908	0.56	-0.0
3,263,524	-		Pf1N1B4_2908	0.56	-0.0
3,263,541	-		Pf1N1B4_2908	0.58	-0.0
3,263,541	-		Pf1N1B4_2908	0.58	-0.0
3,263,541	-		Pf1N1B4_2908	0.58	-1.2
3,263,589	+		Pf1N1B4_2908	0.65	-0.0
3,263,589	+		Pf1N1B4_2908	0.65	-0.0
3,263,678	+		Pf1N1B4_2908	0.78	-0.0
3,263,678	+		Pf1N1B4_2908	0.78	-0.0
3,263,678	+		Pf1N1B4_2908	0.78	-0.0
3,263,678	+		Pf1N1B4_2908	0.78	-0.0
3,263,680	+		Pf1N1B4_2908	0.78	-0.0
3,263,680	+		Pf1N1B4_2908	0.78	-1.9
3,263,681	-		Pf1N1B4_2908	0.79	-0.0
3,263,708	+		Pf1N1B4_2908	0.83	-0.0
3,263,709	-		Pf1N1B4_2908	0.83	-3.1
3,263,725	+		Pf1N1B4_2908	0.85	-0.0
3,263,725	+		Pf1N1B4_2908	0.85	-0.0
3,263,726	-		Pf1N1B4_2908	0.85	-0.0
3,263,742	+		Pf1N1B4_2908	0.87	-0.0
3,263,742	+		Pf1N1B4_2908	0.87	-0.0
3,263,742	+		Pf1N1B4_2908	0.87	-2.3
3,263,743	-				-2.5
3,263,752	+		Pf1N1B4_2908	0.89	-0.0
3,263,752	+		Pf1N1B4_2908	0.89	-2.2
3,263,753	-		Pf1N1B4_2908	0.89	-0.0
3,263,753	-		Pf1N1B4_2908	0.89	-0.0
3,263,753	-				-2.6
3,263,753	-		Pf1N1B4_2908	0.89	-0.0
3,263,753	-		Pf1N1B4_2908	0.89	-0.0
3,263,781	+				-0.0
3,263,782	-				-2.1
3,263,834	+				-3.0
3,263,835	-				-0.0
3,263,835	-				-0.0
3,263,855	-				-0.0
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-2.0
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-1.1
3,263,864	+				-2.4
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-0.0
3,263,864	+				-4.4
3,263,865	-				-0.0
3,263,865	-				-1.3
3,263,865	-				-0.0
3,263,865	-				-0.0
3,263,865	-				-1.8
3,263,865	-				-0.0
3,263,865	-				-0.0
3,263,865	-				-2.2
3,263,865	-				-0.0
3,263,865	-				-0.0
3,263,865	-				-0.0
3,263,865	-				-0.0
3,263,876	-				-3.8
3,263,915	+				-0.0
3,263,915	+				-2.4
3,263,916	-				-0.0
3,263,916	-				-0.0
3,263,916	-				-0.0
3,263,916	-				-0.0
3,263,919	+				-0.0
3,263,919	+				-0.0
3,263,919	+				-2.0
3,263,962	-				-0.0
3,263,962	-				-0.0
3,263,962	-				-2.8
3,264,125	-				-3.2
3,264,228	-				-0.0
3,264,282	+				-2.2
3,264,282	+				-0.0
3,264,282	+				-0.0
3,264,282	+				-0.0
3,264,282	+				-0.0
3,264,282	+				-2.2
3,264,282	+				-0.0
3,264,282	+				-0.0
3,264,283	-				-0.0
3,264,283	-				-0.0
3,264,283	-				-0.0
3,264,283	-				-3.2
3,264,283	-				-0.0
3,264,776	+		Pf1N1B4_2909	0.29	-1.4
3,264,777	-		Pf1N1B4_2909	0.29	-0.0