Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4531
Experiment: Nitrate reduction, replicate C t3
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate C t3 |
|---|---|---|---|---|---|
| remove | |||||
| 4,993,739 | + | -0.0 | |||
| 4,993,868 | - | -2.9 | |||
| 4,993,868 | - | -3.0 | |||
| 4,994,143 | - | Pf1N1B4_4530 | 0.37 | -2.5 | |
| 4,994,143 | - | Pf1N1B4_4530 | 0.37 | -0.0 | |
| 4,994,179 | - | Pf1N1B4_4530 | 0.44 | -0.0 | |
| 4,994,322 | + | Pf1N1B4_4530 | 0.70 | -0.0 | |
| 4,994,656 | + | -0.0 | |||
| 4,994,657 | - | -0.0 | |||
| 4,994,817 | + | Pf1N1B4_4531 | 0.16 | -3.1 | |
| 4,995,726 | + | Pf1N1B4_4531 | 0.61 | -3.5 | |
| 4,995,745 | - | Pf1N1B4_4531 | 0.62 | -2.5 | |
| 4,995,783 | + | -0.6 | |||
| 4,995,813 | + | Pf1N1B4_4531 | 0.66 | -0.0 | |
| 4,996,086 | + | Pf1N1B4_4531 | 0.79 | -1.0 | |
| 4,996,087 | - | Pf1N1B4_4531 | 0.79 | -3.7 | |
| 4,996,549 | + | -0.0 | |||
| 4,996,829 | - | -0.0 | |||
| 4,996,986 | - | -0.0 | |||
| 4,997,210 | + | -0.0 | |||
| 4,997,370 | - | -0.0 | |||
| 4,997,408 | + | -1.6 | |||
| 4,997,453 | - | -2.7 |
Or see this region's nucleotide sequence