Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3524

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
3,929,400	+				-3.1
3,929,400	+				-3.2
3,929,488	-				-0.0
3,929,569	+		Pf1N1B4_3522	0.17	-0.0
3,929,705	+		Pf1N1B4_3522	0.48	-0.0
3,929,705	+		Pf1N1B4_3522	0.48	-0.0
3,929,706	-		Pf1N1B4_3522	0.48	-0.0
3,930,133	+				-2.8
3,930,181	+				-0.0
3,930,235	+				-0.0
3,930,235	+				-0.0
3,930,235	+				-2.8
3,930,235	+				-0.0
3,930,236	-				-2.2
3,930,236	-				-1.1
3,930,236	-				-3.6
3,930,236	-				-1.9
3,930,249	+				-0.0
3,930,250	-				-0.0
3,930,250	-				-0.0
3,930,250	-				-0.0
3,930,288	-				-2.0
3,930,288	-				-0.0
3,930,321	-		Pf1N1B4_3524	0.11	-0.0
3,930,674	-				-3.9
3,930,674	-		Pf1N1B4_3524	0.54	-0.0
3,930,716	+		Pf1N1B4_3524	0.59	-2.4
3,930,716	+		Pf1N1B4_3524	0.59	-3.5
3,930,791	+		Pf1N1B4_3524	0.69	-2.9
3,930,792	-		Pf1N1B4_3524	0.69	-2.4
3,930,792	-		Pf1N1B4_3524	0.69	-3.0
3,930,792	-		Pf1N1B4_3524	0.69	-3.6
3,930,949	+		Pf1N1B4_3524	0.88	-2.7
3,930,949	+		Pf1N1B4_3524	0.88	-0.0
3,930,949	+		Pf1N1B4_3524	0.88	-0.0
3,931,299	-		Pf1N1B4_3525	0.30	-0.0
3,931,431	+		Pf1N1B4_3525	0.46	-0.0
3,931,516	+				-4.0
3,931,516	+		Pf1N1B4_3525	0.56	-3.4
3,931,516	+		Pf1N1B4_3525	0.56	-2.9
3,931,629	+		Pf1N1B4_3525	0.69	-2.6
3,931,629	+		Pf1N1B4_3525	0.69	-2.2
3,931,630	-				-1.9
3,931,948	+				-0.0
3,931,948	+				-0.0
3,931,948	+				-0.0
3,931,949	-				-2.3
3,931,949	-				-0.0
3,931,956	+				-2.8
3,931,956	+				-0.8