Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3282

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
3,668,373	+		Pf1N1B4_3280	0.90	-0.0
3,668,373	+		Pf1N1B4_3280	0.90	-2.4
3,668,373	+				-0.0
3,668,373	+		Pf1N1B4_3280	0.90	-0.0
3,668,373	+		Pf1N1B4_3280	0.90	-0.0
3,668,373	+		Pf1N1B4_3280	0.90	-0.0
3,668,374	-		Pf1N1B4_3280	0.90	-2.6
3,668,439	+				-0.0
3,668,445	+				-0.0
3,668,445	+				-3.4
3,668,478	+				-0.0
3,668,478	+				-3.2
3,668,478	+				-0.0
3,668,478	+				-1.2
3,668,479	-				+0.8
3,668,490	-				-3.4
3,668,490	-				-1.5
3,668,490	-				-2.7
3,668,498	+				-2.9
3,668,499	-				-3.1
3,668,586	+				-0.0
3,668,617	+				-0.0
3,668,640	-				-5.1
3,668,653	+				-0.0
3,668,653	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-0.0
3,668,682	+				-4.2
3,668,683	-				-0.0
3,668,683	-				-4.5
3,668,683	-				-2.4
3,668,683	-				-0.0
3,668,683	-				-0.0
3,668,683	-				-0.0
3,668,683	-				-0.0
3,668,683	-				-0.0
3,668,686	+				-0.0
3,668,687	-				-1.0
3,668,687	-				-4.6
3,668,687	-				-0.0
3,668,726	+				-5.0
3,668,726	+				-0.0
3,668,727	-				-0.0
3,668,727	-				-0.0
3,668,727	-				-0.0
3,668,814	-		Pf1N1B4_3281	0.23	-3.1
3,668,947	+		Pf1N1B4_3281	0.48	-0.0
3,668,948	-		Pf1N1B4_3281	0.48	-0.0
3,668,955	+		Pf1N1B4_3281	0.49	-0.0
3,668,955	+		Pf1N1B4_3281	0.49	-5.2
3,668,955	+		Pf1N1B4_3281	0.49	-4.3
3,668,955	+		Pf1N1B4_3281	0.49	-3.7
3,668,956	-		Pf1N1B4_3281	0.49	-2.7
3,668,956	-		Pf1N1B4_3281	0.49	-0.0
3,668,956	-		Pf1N1B4_3281	0.49	-5.1
3,668,956	-		Pf1N1B4_3281	0.49	-0.0
3,668,956	-		Pf1N1B4_3281	0.49	-4.6
3,669,066	+		Pf1N1B4_3281	0.70	-5.1
3,669,178	-				-6.4
3,669,192	+				-4.7
3,669,193	-				-5.3
3,669,210	+				-4.6
3,669,210	+				-4.5
3,669,211	-				-0.0
3,669,361	-				-0.0
3,669,361	-				-0.0
3,669,440	+		Pf1N1B4_3282	0.17	-0.0
3,669,440	+		Pf1N1B4_3282	0.17	-2.9
3,669,440	+		Pf1N1B4_3282	0.17	-0.0
3,669,441	-		Pf1N1B4_3282	0.17	-0.0
3,669,441	-		Pf1N1B4_3282	0.17	-2.3
3,669,441	-		Pf1N1B4_3282	0.17	-0.0
3,669,441	-		Pf1N1B4_3282	0.17	-0.0
3,669,441	-		Pf1N1B4_3282	0.17	-0.0
3,669,441	-		Pf1N1B4_3282	0.17	-0.0
3,669,480	-		Pf1N1B4_3282	0.25	-0.0
3,669,504	+		Pf1N1B4_3282	0.30	-4.4
3,669,504	+		Pf1N1B4_3282	0.30	-0.0
3,669,504	+		Pf1N1B4_3282	0.30	-1.9
3,669,505	-		Pf1N1B4_3282	0.30	-0.0
3,669,505	-		Pf1N1B4_3282	0.30	-0.0
3,669,743	+		Pf1N1B4_3282	0.77	-2.7
3,669,743	+		Pf1N1B4_3282	0.77	-0.0
3,669,743	+				-0.0
3,669,743	+		Pf1N1B4_3282	0.77	-0.0
3,669,743	+		Pf1N1B4_3282	0.77	-2.7
3,669,743	+		Pf1N1B4_3282	0.77	-0.0
3,669,743	+		Pf1N1B4_3282	0.77	-3.3
3,669,744	-		Pf1N1B4_3282	0.77	-0.0
3,669,744	-		Pf1N1B4_3282	0.77	-0.9
3,669,744	-		Pf1N1B4_3282	0.77	-0.0
3,669,744	-		Pf1N1B4_3282	0.77	-3.2
3,669,744	-		Pf1N1B4_3282	0.77	-3.4
3,669,744	-		Pf1N1B4_3282	0.77	-0.0
3,669,744	-		Pf1N1B4_3282	0.77	-2.0
3,669,744	-		Pf1N1B4_3282	0.77	-2.3
3,669,838	+				-0.0
3,669,838	+				-3.5
3,669,839	-				-1.0
3,669,839	-				-2.2
3,669,839	-				-2.0
3,669,858	+				-0.9
3,669,858	+				-3.9
3,669,858	+				-0.0
3,669,858	+				-0.0
3,669,858	+				-0.0
3,669,858	+				-2.9
3,669,858	+				-0.0
3,669,858	+				-1.7
3,669,859	-				-0.0
3,669,859	-				-0.0
3,669,859	-				-0.0
3,669,859	-				-2.0
3,669,859	-				-3.2
3,669,859	-				-0.0
3,669,859	-				-1.8
3,669,859	-				-3.2
3,669,859	-				-3.6
3,669,861	+				-5.2
3,669,861	+				-0.0
3,669,861	+				-0.0
3,669,861	+				-2.9
3,669,861	+				-2.6
3,669,861	+				-0.0
3,669,861	+				-0.0
3,669,862	-				-0.0
3,669,862	-				-0.0
3,669,862	-				-2.8
3,669,875	+				-2.4
3,669,894	+				-1.9
3,669,894	+				-0.0
3,669,894	+				-0.0
3,669,895	-				-0.0
3,669,895	-				-0.0
3,669,895	-				-0.0
3,669,895	-				-2.6
3,669,895	-				-0.0
3,669,936	+				-1.8
3,669,936	+				-2.1
3,669,936	+				-0.0
3,670,035	+				-0.0
3,670,036	-				-2.0
3,670,036	-				-3.1
3,670,036	-				-3.1
3,670,036	-				-1.2
3,670,036	-				-0.0
3,670,036	-				-0.0
3,670,036	-				-2.0
3,670,036	-				-0.0
3,670,036	-				-0.0
3,670,049	-				-0.0
3,670,101	+				-1.4
3,670,101	+				-0.0
3,670,101	+				-0.0
3,670,102	-				-0.0
3,670,102	-				-3.8
3,670,102	-				-0.0
3,670,102	-				-0.0
3,670,102	-				-2.7
3,670,189	+				-0.0
3,670,189	+				-0.0
3,670,190	-				-0.0
3,670,247	+				-2.6
3,670,269	+				-0.0
3,670,269	+				-1.7
3,670,269	+				-0.0
3,670,270	-				-0.0
3,670,274	-				-0.0
3,670,274	-				-0.0
3,670,274	-				-0.0
3,670,373	+		Pf1N1B4_3283	0.16	-0.0
3,670,374	-		Pf1N1B4_3283	0.16	-0.0
3,670,755	+		Pf1N1B4_3283	0.66	-0.0
3,670,755	+		Pf1N1B4_3283	0.66	-0.0
3,670,755	+		Pf1N1B4_3283	0.66	-0.0
3,670,756	-		Pf1N1B4_3283	0.66	-2.4
3,670,758	+		Pf1N1B4_3283	0.66	-1.8
3,670,758	+		Pf1N1B4_3283	0.66	-1.6
3,670,758	+		Pf1N1B4_3283	0.66	-1.1
3,670,759	-		Pf1N1B4_3283	0.66	-1.6
3,670,759	-		Pf1N1B4_3283	0.66	-4.4
3,670,795	+		Pf1N1B4_3283	0.71	-0.0
3,670,795	+		Pf1N1B4_3283	0.71	-5.3
3,670,795	+		Pf1N1B4_3283	0.71	-4.0
3,670,795	+		Pf1N1B4_3283	0.71	-0.0
3,670,795	+		Pf1N1B4_3283	0.71	-0.0
3,670,796	-		Pf1N1B4_3283	0.71	-2.8
3,670,796	-		Pf1N1B4_3283	0.71	-0.0
3,670,796	-		Pf1N1B4_3283	0.71	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-3.5
3,670,809	+		Pf1N1B4_3283	0.73	-1.4
3,670,809	+		Pf1N1B4_3283	0.73	-1.8
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-2.3
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-1.9
3,670,809	+		Pf1N1B4_3283	0.73	-2.9
3,670,809	+		Pf1N1B4_3283	0.73	-2.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-0.0
3,670,809	+		Pf1N1B4_3283	0.73	-2.0
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,810	-		Pf1N1B4_3283	0.73	-5.5
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,810	-		Pf1N1B4_3283	0.73	-2.6
3,670,810	-		Pf1N1B4_3283	0.73	-0.0
3,670,812	+		Pf1N1B4_3283	0.73	-0.9
3,670,812	+		Pf1N1B4_3283	0.73	-0.0
3,670,812	+		Pf1N1B4_3283	0.73	-0.0
3,670,812	+		Pf1N1B4_3283	0.73	-1.7
3,670,813	-		Pf1N1B4_3283	0.73	-0.0
3,670,813	-		Pf1N1B4_3283	0.73	-0.0
3,670,813	-		Pf1N1B4_3283	0.73	-3.0