Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2868

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
3,214,754	+		Pf1N1B4_2867	0.11	-2.3
3,214,912	+		Pf1N1B4_2867	0.26	+0.0
3,214,912	+		Pf1N1B4_2867	0.26	-4.0
3,214,912	+		Pf1N1B4_2867	0.26	+0.0
3,214,913	-		Pf1N1B4_2867	0.26	+0.0
3,215,074	+		Pf1N1B4_2867	0.41	+0.0
3,215,074	+		Pf1N1B4_2867	0.41	+0.0
3,215,088	+		Pf1N1B4_2867	0.43	+0.0
3,215,190	+		Pf1N1B4_2867	0.53	+0.0
3,215,190	+		Pf1N1B4_2867	0.53	+0.0
3,215,190	+		Pf1N1B4_2867	0.53	+0.0
3,215,259	+		Pf1N1B4_2867	0.59	-3.5
3,215,260	-		Pf1N1B4_2867	0.59	-4.2
3,215,284	+		Pf1N1B4_2867	0.62	+0.0
3,215,656	-				+0.0
3,215,659	+				-3.2
3,215,659	+				-4.3
3,215,659	+				+0.0
3,215,659	+				-2.9
3,215,659	+				-3.1
3,215,659	+				-4.8
3,215,660	-				-5.0
3,215,660	-				-2.8
3,215,660	-				-1.8
3,215,660	-				+0.0
3,215,660	-				+0.0
3,215,660	-				-2.5
3,215,660	-				+0.0
3,215,660	-				+0.0
3,216,071	+		Pf1N1B4_2868	0.51	+0.0
3,216,072	-		Pf1N1B4_2868	0.51	-4.9
3,216,291	-		Pf1N1B4_2868	0.79	-3.0
3,216,303	+		Pf1N1B4_2868	0.81	+0.0
3,216,304	-		Pf1N1B4_2868	0.81	-4.4
3,216,306	+		Pf1N1B4_2868	0.81	-4.4
3,216,306	+		Pf1N1B4_2868	0.81	+0.0
3,216,306	+		Pf1N1B4_2868	0.81	-3.3
3,216,307	-		Pf1N1B4_2868	0.82	+0.0
3,216,307	-		Pf1N1B4_2868	0.82	+0.0
3,216,307	-		Pf1N1B4_2868	0.82	+0.0
3,216,340	+		Pf1N1B4_2868	0.86	+0.0
3,216,397	-				-3.8
3,216,397	-				+0.0
3,216,682	-		Pf1N1B4_2869	0.24	+0.0
3,216,682	-		Pf1N1B4_2869	0.24	-1.5
3,216,684	+		Pf1N1B4_2869	0.25	+0.0
3,216,684	+		Pf1N1B4_2869	0.25	-4.1
3,216,684	+		Pf1N1B4_2869	0.25	+0.0
3,216,684	+		Pf1N1B4_2869	0.25	+0.0
3,216,684	+		Pf1N1B4_2869	0.25	-5.2
3,216,685	-		Pf1N1B4_2869	0.25	-2.2
3,216,720	+		Pf1N1B4_2869	0.29	+0.0
3,216,720	+		Pf1N1B4_2869	0.29	-3.5
3,216,720	+		Pf1N1B4_2869	0.29	-1.7
3,216,842	+		Pf1N1B4_2869	0.43	+0.0
3,216,919	+		Pf1N1B4_2869	0.52	+0.0
3,217,092	+		Pf1N1B4_2869	0.72	-3.3
3,217,133	+		Pf1N1B4_2869	0.76	+0.0
3,217,203	+		Pf1N1B4_2869	0.85	+0.0
3,217,204	-		Pf1N1B4_2869	0.85	+0.0
3,217,253	+				-2.9
3,217,254	-				+0.0
3,217,254	-				+0.0
3,217,263	-				+0.0
3,217,263	-				+0.0
3,217,263	-				+0.0
3,217,264	+				-3.1
3,217,264	+				+0.0
3,217,264	+				-2.6
3,217,289	+				-3.0
3,217,307	-				-1.2
3,217,334	+				-3.0
3,217,334	+				-1.4
3,217,335	-				+0.0
3,217,391	-				+0.0
3,217,391	-				+0.0
3,217,401	-				+0.0
3,217,417	-				-2.5
3,217,417	-				+0.0
3,217,417	-				-0.6
3,217,417	-				+0.0