Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2742

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
3,079,680	-		Pf1N1B4_2740	0.85	-0.0
3,080,118	-		Pf1N1B4_2741	0.52	-0.0
3,080,159	+		Pf1N1B4_2741	0.59	-5.5
3,080,159	+		Pf1N1B4_2741	0.59	-2.7
3,080,159	+		Pf1N1B4_2741	0.59	-2.3
3,080,159	+		Pf1N1B4_2741	0.59	-0.0
3,080,160	-		Pf1N1B4_2741	0.59	-0.0
3,080,160	-		Pf1N1B4_2741	0.59	-3.2
3,080,405	+				-0.0
3,080,405	+				-0.0
3,080,405	+				-2.4
3,080,405	+				-0.0
3,080,405	+				-0.0
3,080,405	+				-0.0
3,080,405	+				-3.1
3,080,405	+				-2.9
3,080,405	+				-2.1
3,080,406	-				-0.0
3,080,406	-				-0.0
3,080,406	-				-2.3
3,080,406	-				-0.0
3,080,406	-				-0.0
3,080,406	-				-0.0
3,080,478	+				-0.0
3,080,580	+				-1.7
3,080,581	-				-2.2
3,080,727	+		Pf1N1B4_2742	0.19	-0.0
3,080,770	+		Pf1N1B4_2742	0.24	-0.0
3,080,771	-		Pf1N1B4_2742	0.24	-1.8
3,080,771	-		Pf1N1B4_2742	0.24	-3.9
3,080,771	-		Pf1N1B4_2742	0.24	-0.0
3,080,771	-		Pf1N1B4_2742	0.24	-0.0
3,080,774	+		Pf1N1B4_2742	0.24	-0.0
3,080,774	+		Pf1N1B4_2742	0.24	-0.0
3,080,774	+		Pf1N1B4_2742	0.24	-0.7
3,080,774	+		Pf1N1B4_2742	0.24	-0.0
3,080,775	-		Pf1N1B4_2742	0.24	-3.7
3,080,775	-		Pf1N1B4_2742	0.24	-2.5
3,080,775	-		Pf1N1B4_2742	0.24	-0.0
3,080,775	-		Pf1N1B4_2742	0.24	-3.2
3,080,795	+		Pf1N1B4_2742	0.26	-0.0
3,080,795	+		Pf1N1B4_2742	0.26	-1.9
3,080,795	+		Pf1N1B4_2742	0.26	-0.0
3,080,834	+		Pf1N1B4_2742	0.30	-0.0
3,080,834	+		Pf1N1B4_2742	0.30	-0.6
3,080,835	-		Pf1N1B4_2742	0.31	-0.0
3,080,859	-		Pf1N1B4_2742	0.33	-0.0
3,080,859	-		Pf1N1B4_2742	0.33	-2.7
3,080,924	+		Pf1N1B4_2742	0.40	-0.0
3,080,924	+		Pf1N1B4_2742	0.40	-0.0
3,080,924	+		Pf1N1B4_2742	0.40	-0.0
3,080,924	+		Pf1N1B4_2742	0.40	-0.0
3,080,924	+		Pf1N1B4_2742	0.40	-2.4
3,080,924	+		Pf1N1B4_2742	0.40	-0.0
3,080,924	+		Pf1N1B4_2742	0.40	-2.5
3,080,925	-		Pf1N1B4_2742	0.40	-1.7
3,080,925	-		Pf1N1B4_2742	0.40	-0.0
3,080,925	-		Pf1N1B4_2742	0.40	-3.1
3,080,925	-		Pf1N1B4_2742	0.40	-0.0
3,080,925	-		Pf1N1B4_2742	0.40	-0.0
3,080,930	+		Pf1N1B4_2742	0.40	-0.0
3,080,930	+		Pf1N1B4_2742	0.40	-0.0
3,080,930	+		Pf1N1B4_2742	0.40	-3.7
3,080,931	-		Pf1N1B4_2742	0.41	-0.0
3,080,931	-		Pf1N1B4_2742	0.41	-0.0
3,080,931	-		Pf1N1B4_2742	0.41	-0.0
3,080,954	+		Pf1N1B4_2742	0.43	-0.0
3,080,954	+		Pf1N1B4_2742	0.43	-0.0
3,080,954	+		Pf1N1B4_2742	0.43	-0.0
3,080,955	-		Pf1N1B4_2742	0.43	-0.0
3,080,955	-		Pf1N1B4_2742	0.43	-0.0
3,081,136	-		Pf1N1B4_2742	0.62	-0.0
3,081,188	-		Pf1N1B4_2742	0.67	-0.0
3,081,188	-		Pf1N1B4_2742	0.67	-3.8
3,081,308	+		Pf1N1B4_2742	0.80	-0.0
3,081,309	-				-1.1
3,081,475	+				-4.5
3,081,495	+				-0.0
3,081,495	+				-0.0
3,081,495	+				-0.0
3,081,495	+				-0.0
3,081,496	-				-0.0
3,081,496	-				-0.0
3,081,496	-				-2.0
3,081,496	-				-0.0
3,081,882	+		Pf1N1B4_2743	0.43	-0.0
3,081,883	-		Pf1N1B4_2743	0.43	-0.8
3,081,883	-		Pf1N1B4_2743	0.43	-1.8
3,081,883	-		Pf1N1B4_2743	0.43	-0.0
3,081,883	-		Pf1N1B4_2743	0.43	-0.0
3,081,883	-		Pf1N1B4_2743	0.43	-0.0
3,081,886	+		Pf1N1B4_2743	0.43	-0.0
3,081,887	-		Pf1N1B4_2743	0.43	-0.0
3,081,887	-				-1.0
3,081,887	-		Pf1N1B4_2743	0.43	-0.0
3,081,955	+		Pf1N1B4_2743	0.51	-0.0
3,081,955	+		Pf1N1B4_2743	0.51	-0.0
3,081,955	+		Pf1N1B4_2743	0.51	-0.0
3,081,955	+		Pf1N1B4_2743	0.51	-0.0
3,081,955	+		Pf1N1B4_2743	0.51	-0.0
3,081,956	-		Pf1N1B4_2743	0.51	-0.0
3,081,956	-		Pf1N1B4_2743	0.51	-0.0
3,081,956	-		Pf1N1B4_2743	0.51	-0.0
3,081,979	+		Pf1N1B4_2743	0.53	-0.0
3,081,979	+		Pf1N1B4_2743	0.53	-5.6
3,081,979	+		Pf1N1B4_2743	0.53	-1.2
3,081,979	+		Pf1N1B4_2743	0.53	-0.0
3,081,979	+		Pf1N1B4_2743	0.53	-0.0
3,081,979	+		Pf1N1B4_2743	0.53	-0.0
3,081,980	-		Pf1N1B4_2743	0.54	-2.5
3,082,058	+		Pf1N1B4_2743	0.62	-0.0
3,082,058	+		Pf1N1B4_2743	0.62	-0.0
3,082,058	+		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-1.6
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-1.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-1.9
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-0.0
3,082,059	-		Pf1N1B4_2743	0.62	-2.3
3,082,061	-		Pf1N1B4_2743	0.63	-0.0
3,082,061	-		Pf1N1B4_2743	0.63	-0.0
3,082,451	+				-2.5
3,082,451	+				-2.6
3,082,452	-				-0.0
3,082,452	-				-1.8
3,082,452	-				-2.5
3,082,452	-				-0.0
3,082,452	-				-0.0
3,082,452	-				-0.0
3,082,452	-				-0.0
3,082,452	-				-0.0
3,082,455	+				-0.0
3,082,456	-				-0.0
3,082,456	-				-2.2
3,082,456	-				-0.0
3,082,456	-				-0.0