Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2659

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
2,993,905	+		Pf1N1B4_2658	0.11	-0.0
2,993,906	-		Pf1N1B4_2658	0.12	-4.4
2,994,244	+				-0.0
2,994,244	+				-0.0
2,994,244	+				-0.0
2,994,244	+				-2.8
2,994,244	+				-0.0
2,994,244	+				-0.0
2,994,245	-				-0.0
2,994,245	-				-3.8
2,994,245	-				-2.6
2,994,245	-				-0.0
2,994,245	-				-0.0
2,994,256	-				-0.0
2,994,468	+		Pf1N1B4_2659	0.24	-0.0
2,994,469	-		Pf1N1B4_2659	0.24	-0.0
2,994,469	-		Pf1N1B4_2659	0.24	-3.2
2,994,469	-		Pf1N1B4_2659	0.24	-0.0
2,994,469	-		Pf1N1B4_2659	0.24	-3.3
2,994,469	-		Pf1N1B4_2659	0.24	-0.0
2,994,469	-		Pf1N1B4_2659	0.24	-3.5
2,994,469	-		Pf1N1B4_2659	0.24	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-5.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+				-2.2
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-4.1
2,994,585	+		Pf1N1B4_2659	0.39	-2.5
2,994,585	+				-3.3
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,585	+		Pf1N1B4_2659	0.39	-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-3.2
2,994,586	-		Pf1N1B4_2659	0.39	-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-3.1
2,994,586	-		Pf1N1B4_2659	0.39	-5.4
2,994,586	-		Pf1N1B4_2659	0.39	-3.3
2,994,586	-		Pf1N1B4_2659	0.39	-3.8
2,994,586	-		Pf1N1B4_2659	0.39	-0.0
2,994,586	-				-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-3.9
2,994,586	-		Pf1N1B4_2659	0.39	-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-0.0
2,994,586	-		Pf1N1B4_2659	0.39	-4.0
2,994,586	-		Pf1N1B4_2659	0.39	-3.7
2,994,586	-		Pf1N1B4_2659	0.39	-5.5
2,994,739	+		Pf1N1B4_2659	0.58	-0.0
2,994,740	-		Pf1N1B4_2659	0.58	-0.0
2,994,750	+		Pf1N1B4_2659	0.59	-0.0
2,994,751	-		Pf1N1B4_2659	0.59	-0.0
2,994,774	+		Pf1N1B4_2659	0.62	-0.0
2,994,774	+		Pf1N1B4_2659	0.62	-0.0
2,994,775	-		Pf1N1B4_2659	0.62	-0.0
2,995,267	+				-4.2
2,995,267	+				-1.8
2,995,268	-				-3.6
2,995,268	-				-2.8
2,995,370	-				-4.8
2,995,405	+		Pf1N1B4_2660	0.12	-0.0
2,995,405	+				-0.0
2,995,406	-		Pf1N1B4_2660	0.12	-2.9
2,995,732	+		Pf1N1B4_2660	0.29	-3.0
2,995,732	+		Pf1N1B4_2660	0.29	-0.0
2,995,733	-		Pf1N1B4_2660	0.29	-2.2
2,995,733	-		Pf1N1B4_2660	0.29	-0.0
2,995,733	-		Pf1N1B4_2660	0.29	-0.0
2,995,733	-		Pf1N1B4_2660	0.29	-0.0
2,995,733	-		Pf1N1B4_2660	0.29	-5.6
2,995,733	-		Pf1N1B4_2660	0.29	-3.2
2,995,733	-		Pf1N1B4_2660	0.29	-0.0
2,995,780	+		Pf1N1B4_2660	0.32	-0.0
2,995,783	+		Pf1N1B4_2660	0.32	-0.0
2,995,784	-		Pf1N1B4_2660	0.32	-4.0
2,995,784	-		Pf1N1B4_2660	0.32	-0.0
2,995,784	-		Pf1N1B4_2660	0.32	-4.1
2,995,784	-		Pf1N1B4_2660	0.32	-0.0
2,995,784	-		Pf1N1B4_2660	0.32	-4.5
2,995,822	+		Pf1N1B4_2660	0.34	-2.9
2,995,822	+		Pf1N1B4_2660	0.34	-0.0
2,995,822	+		Pf1N1B4_2660	0.34	-2.2
2,995,822	+		Pf1N1B4_2660	0.34	-0.0
2,995,823	-		Pf1N1B4_2660	0.34	-0.0
2,995,823	-		Pf1N1B4_2660	0.34	-0.0
2,996,029	+		Pf1N1B4_2660	0.45	-0.0