Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1497

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
1,727,607	+		Pf1N1B4_1496	0.62	-2.9
1,727,607	+		Pf1N1B4_1496	0.62	-0.0
1,727,608	-		Pf1N1B4_1496	0.62	-0.0
1,727,608	-		Pf1N1B4_1496	0.62	-0.0
1,727,608	-		Pf1N1B4_1496	0.62	-0.0
1,727,924	-		Pf1N1B4_1496	0.80	-1.7
1,728,161	+				-0.9
1,728,161	+				-0.0
1,728,211	+				-0.0
1,728,211	+				-3.5
1,728,211	+				-0.0
1,728,212	-				-0.0
1,728,261	+				-1.7
1,728,297	+				-2.3
1,728,298	-				-2.4
1,728,298	-				-0.0
1,728,298	-				-3.3
1,728,506	-				-0.0
1,728,625	+				-0.0
1,728,767	+		Pf1N1B4_1497	0.14	-0.0
1,729,145	-		Pf1N1B4_1497	0.25	-2.8
1,729,294	+		Pf1N1B4_1497	0.30	-2.9
1,729,370	-		Pf1N1B4_1497	0.32	-0.0
1,729,420	+		Pf1N1B4_1497	0.33	-2.6
1,729,420	+		Pf1N1B4_1497	0.33	-1.0
1,729,420	+		Pf1N1B4_1497	0.33	-3.3
1,729,420	+		Pf1N1B4_1497	0.33	-0.0
1,729,420	+		Pf1N1B4_1497	0.33	-4.8
1,729,420	+		Pf1N1B4_1497	0.33	-0.0
1,729,420	+		Pf1N1B4_1497	0.33	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-3.6
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-2.7
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-4.4
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-3.7
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,421	-		Pf1N1B4_1497	0.34	-0.0
1,729,547	+		Pf1N1B4_1497	0.37	-3.2
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-4.5
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,678	+		Pf1N1B4_1497	0.41	-0.0
1,729,679	-		Pf1N1B4_1497	0.41	-2.6
1,729,679	-		Pf1N1B4_1497	0.41	-0.0
1,729,679	-		Pf1N1B4_1497	0.41	-0.0
1,729,679	-		Pf1N1B4_1497	0.41	-2.5
1,729,679	-		Pf1N1B4_1497	0.41	-2.1
1,729,831	+		Pf1N1B4_1497	0.46	-2.6
1,729,831	+		Pf1N1B4_1497	0.46	-0.0
1,730,047	+		Pf1N1B4_1497	0.52	-0.0
1,730,048	-		Pf1N1B4_1497	0.52	-0.0
1,730,251	+		Pf1N1B4_1497	0.58	-0.0
1,730,389	+		Pf1N1B4_1497	0.62	-0.0
1,730,392	+		Pf1N1B4_1497	0.62	-3.1
1,730,392	+		Pf1N1B4_1497	0.62	-2.2
1,730,393	-		Pf1N1B4_1497	0.63	-0.0
1,730,393	-		Pf1N1B4_1497	0.63	-0.0
1,730,393	-		Pf1N1B4_1497	0.63	-0.0
1,730,393	-		Pf1N1B4_1497	0.63	-3.2
1,730,393	-		Pf1N1B4_1497	0.63	-0.0
1,730,395	+		Pf1N1B4_1497	0.63	-2.6
1,730,395	+		Pf1N1B4_1497	0.63	-2.7
1,730,396	-		Pf1N1B4_1497	0.63	-2.5
1,730,437	+		Pf1N1B4_1497	0.64	-1.7
1,730,437	+		Pf1N1B4_1497	0.64	-0.0
1,730,438	-		Pf1N1B4_1497	0.64	-0.0
1,730,513	-		Pf1N1B4_1497	0.66	-0.0
1,730,665	+		Pf1N1B4_1497	0.71	-0.0
1,730,666	-		Pf1N1B4_1497	0.71	-0.0
1,730,702	-		Pf1N1B4_1497	0.72	-0.0
1,730,728	+		Pf1N1B4_1497	0.73	-0.0
1,730,728	+		Pf1N1B4_1497	0.73	-0.0
1,730,729	-		Pf1N1B4_1497	0.73	-0.0
1,730,917	+		Pf1N1B4_1497	0.78	-2.5
1,730,917	+		Pf1N1B4_1497	0.78	-0.0
1,730,917	+		Pf1N1B4_1497	0.78	-0.0
1,730,918	-		Pf1N1B4_1497	0.78	-3.4
1,730,918	-		Pf1N1B4_1497	0.78	-0.0
1,730,918	-		Pf1N1B4_1497	0.78	-0.0
1,731,367	+				-0.0
1,731,367	+				-3.5
1,731,367	+				-1.2
1,731,368	-				-0.0
1,731,368	-				-3.4
1,731,368	-				-0.0
1,731,409	+				-2.8
1,731,411	+				-0.0
1,731,412	-				-0.0
1,731,412	-				-3.4
1,731,412	-				-0.0
1,731,553	+				-3.5
1,731,553	+				-0.0
1,731,554	-				-0.0
1,731,554	-				-0.0
1,731,554	-				-0.0
1,731,554	-				-0.0
1,731,926	-		Pf1N1B4_1498	0.16	-0.0
1,731,949	+		Pf1N1B4_1498	0.17	-1.6
1,731,949	+		Pf1N1B4_1498	0.17	-0.0
1,731,949	+		Pf1N1B4_1498	0.17	-0.0
1,731,949	+		Pf1N1B4_1498	0.17	-0.0
1,731,950	-		Pf1N1B4_1498	0.17	-3.1
1,731,950	-		Pf1N1B4_1498	0.17	-1.6
1,731,950	-		Pf1N1B4_1498	0.17	-0.0
1,731,950	-		Pf1N1B4_1498	0.17	-0.0
1,731,950	-		Pf1N1B4_1498	0.17	-0.0
1,731,997	+		Pf1N1B4_1498	0.20	-0.0
1,731,997	+		Pf1N1B4_1498	0.20	-0.0
1,731,997	+		Pf1N1B4_1498	0.20	-5.7
1,731,998	-		Pf1N1B4_1498	0.21	-0.0
1,731,998	-		Pf1N1B4_1498	0.21	-0.0
1,731,998	-		Pf1N1B4_1498	0.21	-0.0
1,731,998	-		Pf1N1B4_1498	0.21	-2.8
1,731,998	-		Pf1N1B4_1498	0.21	-0.0
1,731,998	-		Pf1N1B4_1498	0.21	-2.5
1,731,999	+		Pf1N1B4_1498	0.21	-2.5
1,731,999	+		Pf1N1B4_1498	0.21	-0.0
1,731,999	+		Pf1N1B4_1498	0.21	-0.8
1,732,000	-		Pf1N1B4_1498	0.21	-0.0
1,732,000	-		Pf1N1B4_1498	0.21	-0.7
1,732,055	-		Pf1N1B4_1498	0.24	-3.5
1,732,267	+		Pf1N1B4_1498	0.39	-0.0
1,732,267	+		Pf1N1B4_1498	0.39	-0.0
1,732,267	+		Pf1N1B4_1498	0.39	-0.0
1,732,268	-		Pf1N1B4_1498	0.39	-1.6
1,732,268	-		Pf1N1B4_1498	0.39	-0.0
1,732,268	-		Pf1N1B4_1498	0.39	-1.3
1,732,270	+		Pf1N1B4_1498	0.39	-2.7
1,732,357	+		Pf1N1B4_1498	0.45	-0.0
1,732,358	-		Pf1N1B4_1498	0.45	-0.0
1,732,358	-		Pf1N1B4_1498	0.45	-0.0
1,732,358	-		Pf1N1B4_1498	0.45	-1.9
1,732,421	-		Pf1N1B4_1498	0.49	-1.7
1,732,555	+		Pf1N1B4_1498	0.59	-0.0