Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1353

Experiment: Nitrate reduction, replicate C t3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t3
1,546,939	-				-0.0
1,547,087	+		Pf1N1B4_1351	0.27	-0.0
1,547,088	-		Pf1N1B4_1351	0.27	-2.9
1,547,324	+		Pf1N1B4_1351	0.71	-3.0
1,547,324	+		Pf1N1B4_1351	0.71	-0.0
1,547,324	+		Pf1N1B4_1351	0.71	-0.0
1,547,325	-		Pf1N1B4_1351	0.72	-5.4
1,547,364	-		Pf1N1B4_1351	0.79	-2.0
1,547,364	-		Pf1N1B4_1351	0.79	-0.0
1,547,364	-		Pf1N1B4_1351	0.79	-3.0
1,547,364	-				-1.4
1,547,448	-				-0.0
1,547,450	+				-0.0
1,547,450	+				-0.0
1,547,450	+				-0.0
1,547,451	-				-0.0
1,547,451	-				-0.0
1,547,451	-				-0.0
1,547,451	-				-0.0
1,547,593	+		Pf1N1B4_1352	0.38	-0.0
1,547,782	+				-0.0
1,547,933	-				-2.7
1,548,023	-				-2.6
1,548,309	+		Pf1N1B4_1353	0.23	-0.0
1,548,718	+		Pf1N1B4_1353	0.47	-0.0
1,548,719	-		Pf1N1B4_1353	0.48	-2.5
1,548,719	-		Pf1N1B4_1353	0.48	-0.0
1,548,785	+		Pf1N1B4_1353	0.51	-0.0
1,548,786	-		Pf1N1B4_1353	0.51	-0.0
1,548,786	-		Pf1N1B4_1353	0.51	-0.8
1,548,786	-		Pf1N1B4_1353	0.51	-0.0
1,549,114	+		Pf1N1B4_1353	0.71	-2.1
1,549,115	-		Pf1N1B4_1353	0.71	-0.0
1,549,115	-		Pf1N1B4_1353	0.71	-0.0
1,549,126	+		Pf1N1B4_1353	0.71	-2.4
1,549,126	+		Pf1N1B4_1353	0.71	-0.0
1,549,126	+		Pf1N1B4_1353	0.71	-0.0
1,549,126	+		Pf1N1B4_1353	0.71	-0.0
1,549,233	-		Pf1N1B4_1353	0.78	-2.2
1,549,495	+				-0.0
1,549,496	-				+1.0
1,549,496	-				-0.0
1,549,528	+				-2.2
1,549,528	+				-0.0
1,549,528	+				-0.0
1,549,528	+				-0.0
1,549,528	+				-0.0
1,549,529	-				-0.0
1,549,529	-				-1.8
1,549,556	+				-1.6
1,549,597	+				-3.1
1,549,597	+				-2.8
1,549,597	+				-0.0
1,549,598	-				-0.0
1,549,620	+				-0.0
1,549,620	+				-0.0
1,549,620	+				-0.0
1,549,621	-				-0.0
1,549,736	-				-0.0
1,549,739	+				-0.0
1,549,740	-				-2.4
1,549,740	-				-0.0
1,549,740	-				-3.6
1,549,740	-				-0.0
1,549,740	-				-0.0
1,549,740	-				-2.1
1,549,740	-				-3.3
1,549,740	-				-2.7
1,549,740	-				-0.0
1,549,791	+				-0.0
1,549,919	+				-3.6
1,549,919	+				-0.0
1,549,935	-		Pf1N1B4_1354	0.10	-0.0
1,549,935	-		Pf1N1B4_1354	0.10	-0.0
1,550,179	-		Pf1N1B4_1354	0.20	-3.3
1,550,179	-		Pf1N1B4_1354	0.20	-0.0
1,550,374	-		Pf1N1B4_1354	0.28	-0.0
1,550,374	-		Pf1N1B4_1354	0.28	-1.9
1,550,374	-		Pf1N1B4_1354	0.28	-4.1
1,550,374	-		Pf1N1B4_1354	0.28	-0.0
1,550,374	-		Pf1N1B4_1354	0.28	-0.0