Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3249 and tRNA-Phe are separated by 407 nucleotides tRNA-Phe and DVU3250 are separated by 129 nucleotides
DVU3249: DVU3249 - lipoprotein, putative (TIGR), at 3,421,807 to 3,422,487
DVU3249
DVU_tRNA-Phe-1: tRNA-Phe - tRNA with anticodon GAA for Phe (VIMSS-AUTO), at 3,422,895 to 3,422,970
tRNA-Phe
DVU3250: DVU3250 - hypothetical protein (TIGR), at 3,423,100 to 3,423,744
DVU3250
Position (kb)
3422
3423 Strain fitness (log2 ratio)
-2
-1
0
1 at 3421.898 kb on - strand, within DVU3249 at 3422.017 kb on + strand, within DVU3249 at 3422.017 kb on + strand, within DVU3249 at 3422.017 kb on + strand, within DVU3249 at 3422.024 kb on - strand, within DVU3249 at 3422.025 kb on - strand, within DVU3249 at 3422.025 kb on - strand, within DVU3249 at 3422.025 kb on - strand, within DVU3249 at 3422.053 kb on + strand, within DVU3249 at 3422.087 kb on - strand, within DVU3249 at 3422.094 kb on - strand, within DVU3249 at 3422.118 kb on + strand, within DVU3249 at 3422.123 kb on + strand, within DVU3249 at 3422.125 kb on + strand, within DVU3249 at 3422.133 kb on - strand, within DVU3249 at 3422.159 kb on + strand, within DVU3249 at 3422.159 kb on + strand, within DVU3249 at 3422.159 kb on + strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.167 kb on - strand, within DVU3249 at 3422.213 kb on + strand, within DVU3249 at 3422.213 kb on + strand, within DVU3249 at 3422.290 kb on - strand, within DVU3249 at 3422.361 kb on - strand, within DVU3249 at 3422.468 kb on - strand at 3422.621 kb on - strand at 3422.649 kb on - strand at 3422.649 kb on - strand at 3422.661 kb on + strand at 3422.704 kb on - strand at 3422.790 kb on - strand at 3422.812 kb on + strand at 3422.827 kb on - strand at 3422.829 kb on + strand at 3422.840 kb on - strand at 3422.848 kb on - strand at 3422.848 kb on - strand at 3423.089 kb on + strand at 3423.217 kb on - strand, within DVU3250 at 3423.234 kb on - strand, within DVU3250 at 3423.329 kb on + strand, within DVU3250 at 3423.329 kb on + strand, within DVU3250 at 3423.334 kb on + strand, within DVU3250 at 3423.337 kb on - strand, within DVU3250 at 3423.374 kb on - strand, within DVU3250 at 3423.381 kb on + strand, within DVU3250 at 3423.434 kb on + strand, within DVU3250 at 3423.447 kb on - strand, within DVU3250 at 3423.550 kb on + strand, within DVU3250 at 3423.553 kb on - strand, within DVU3250 at 3423.603 kb on + strand, within DVU3250 at 3423.603 kb on + strand, within DVU3250 at 3423.604 kb on + strand, within DVU3250 at 3423.605 kb on - strand, within DVU3250 at 3423.611 kb on - strand, within DVU3250 at 3423.675 kb on + strand, within DVU3250 at 3423.699 kb on - strand at 3423.742 kb on + strand at 3423.876 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 3,421,898 - DVU3249 0.13 -0.9 3,422,017 + DVU3249 0.31 +0.1 3,422,017 + DVU3249 0.31 -0.2 3,422,017 + DVU3249 0.31 -1.4 3,422,024 - DVU3249 0.32 +0.4 3,422,025 - DVU3249 0.32 -0.2 3,422,025 - DVU3249 0.32 -0.2 3,422,025 - DVU3249 0.32 -1.7 3,422,053 + DVU3249 0.36 -0.1 3,422,087 - DVU3249 0.41 +0.1 3,422,094 - DVU3249 0.42 +0.1 3,422,118 + DVU3249 0.46 -1.3 3,422,123 + DVU3249 0.46 +0.5 3,422,125 + DVU3249 0.47 -2.1 3,422,133 - DVU3249 0.48 -0.6 3,422,159 + DVU3249 0.52 -0.6 3,422,159 + DVU3249 0.52 -0.3 3,422,159 + DVU3249 0.52 -1.3 3,422,167 - DVU3249 0.53 -0.2 3,422,167 - DVU3249 0.53 -0.2 3,422,167 - DVU3249 0.53 -0.0 3,422,167 - DVU3249 0.53 +0.2 3,422,167 - DVU3249 0.53 -0.3 3,422,167 - DVU3249 0.53 -0.3 3,422,167 - DVU3249 0.53 +0.7 3,422,167 - DVU3249 0.53 +0.5 3,422,167 - DVU3249 0.53 +0.0 3,422,213 + DVU3249 0.60 -0.9 3,422,213 + DVU3249 0.60 +0.1 3,422,290 - DVU3249 0.71 -0.1 3,422,361 - DVU3249 0.81 +0.4 3,422,468 - -0.3 3,422,621 - +0.2 3,422,649 - +0.4 3,422,649 - -2.0 3,422,661 + +0.7 3,422,704 - -0.2 3,422,790 - -0.1 3,422,812 + -0.1 3,422,827 - -0.8 3,422,829 + -0.2 3,422,840 - -0.9 3,422,848 - -1.3 3,422,848 - +0.1 3,423,089 + +0.1 3,423,217 - DVU3250 0.18 -0.2 3,423,234 - DVU3250 0.21 +0.1 3,423,329 + DVU3250 0.36 -0.7 3,423,329 + DVU3250 0.36 -0.1 3,423,334 + DVU3250 0.36 +0.3 3,423,337 - DVU3250 0.37 -0.4 3,423,374 - DVU3250 0.42 +0.5 3,423,381 + DVU3250 0.44 +0.4 3,423,434 + DVU3250 0.52 +0.1 3,423,447 - DVU3250 0.54 +0.5 3,423,550 + DVU3250 0.70 +0.4 3,423,553 - DVU3250 0.70 -0.2 3,423,603 + DVU3250 0.78 -1.8 3,423,603 + DVU3250 0.78 -0.1 3,423,604 + DVU3250 0.78 -1.0 3,423,605 - DVU3250 0.78 -1.6 3,423,611 - DVU3250 0.79 -0.6 3,423,675 + DVU3250 0.89 -0.4 3,423,699 - -0.0 3,423,742 + -0.0 3,423,876 + -0.7
Or see this region's nucleotide sequence