Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2428 and DVU2429 are separated by 226 nucleotides DVU2429 and DVU2430 overlap by 4 nucleotides DVU2430 and DVU2431 are separated by 88 nucleotides DVU2431 and DVU2432 are separated by 23 nucleotides DVU2432 and DVU2434 are separated by 338 nucleotides
DVU2428: DVU2428 - lipoprotein, putative (TIGR), at 2,532,467 to 2,532,925
DVU2428
DVU2429: DVU2429 - hypothetical protein (TIGR), at 2,533,152 to 2,533,262
DVU2429
DVU2430: DVU2430 - RNA-binding protein (TIGR), at 2,533,259 to 2,533,525
DVU2430
DVU2431: DVU2431 - hypothetical protein (TIGR), at 2,533,614 to 2,533,763
DVU2431
DVU2432: DVU2432 - sensory box/GGDEF domain/EAL domain protein (TIGR), at 2,533,787 to 2,538,028
DVU2432
DVU2434: DVU2434 - hypothetical protein (TIGR), at 2,538,367 to 2,538,774
DVU2434
Position (kb)
2533
2534
2535
2536
2537
2538
2539 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2532.795 kb on - strand, within DVU2428 at 2532.808 kb on - strand, within DVU2428 at 2532.808 kb on - strand, within DVU2428 at 2532.819 kb on + strand, within DVU2428 at 2532.864 kb on - strand, within DVU2428 at 2532.886 kb on - strand at 2532.966 kb on + strand at 2532.966 kb on + strand at 2533.002 kb on + strand at 2533.010 kb on - strand at 2533.077 kb on - strand at 2533.127 kb on - strand at 2533.138 kb on + strand at 2533.252 kb on - strand at 2533.397 kb on + strand, within DVU2430 at 2533.412 kb on - strand, within DVU2430 at 2533.438 kb on + strand, within DVU2430 at 2533.444 kb on - strand, within DVU2430 at 2533.451 kb on - strand, within DVU2430 at 2533.477 kb on + strand, within DVU2430 at 2533.493 kb on + strand, within DVU2430 at 2533.616 kb on + strand at 2533.701 kb on + strand, within DVU2431 at 2533.701 kb on + strand, within DVU2431 at 2533.707 kb on + strand, within DVU2431 at 2533.707 kb on + strand, within DVU2431 at 2533.709 kb on - strand, within DVU2431 at 2533.709 kb on - strand, within DVU2431 at 2533.721 kb on - strand, within DVU2431 at 2533.768 kb on - strand at 2533.801 kb on - strand at 2533.816 kb on - strand at 2533.823 kb on - strand at 2533.829 kb on + strand at 2533.884 kb on - strand at 2533.886 kb on - strand at 2533.890 kb on + strand at 2533.957 kb on + strand at 2534.050 kb on - strand at 2534.175 kb on - strand at 2534.175 kb on - strand at 2534.192 kb on + strand at 2534.192 kb on + strand at 2534.202 kb on + strand at 2534.210 kb on - strand at 2534.229 kb on + strand, within DVU2432 at 2534.249 kb on - strand, within DVU2432 at 2534.303 kb on - strand, within DVU2432 at 2534.350 kb on - strand, within DVU2432 at 2534.526 kb on - strand, within DVU2432 at 2534.538 kb on - strand, within DVU2432 at 2534.635 kb on + strand, within DVU2432 at 2534.643 kb on - strand, within DVU2432 at 2534.656 kb on - strand, within DVU2432 at 2534.658 kb on + strand, within DVU2432 at 2534.850 kb on + strand, within DVU2432 at 2534.882 kb on - strand, within DVU2432 at 2534.910 kb on + strand, within DVU2432 at 2535.086 kb on - strand, within DVU2432 at 2535.147 kb on + strand, within DVU2432 at 2535.173 kb on - strand, within DVU2432 at 2535.184 kb on + strand, within DVU2432 at 2535.198 kb on - strand, within DVU2432 at 2535.247 kb on + strand, within DVU2432 at 2535.248 kb on + strand, within DVU2432 at 2535.364 kb on + strand, within DVU2432 at 2535.384 kb on + strand, within DVU2432 at 2535.424 kb on + strand, within DVU2432 at 2535.473 kb on + strand, within DVU2432 at 2535.478 kb on + strand, within DVU2432 at 2535.590 kb on + strand, within DVU2432 at 2535.625 kb on + strand, within DVU2432 at 2535.625 kb on + strand, within DVU2432 at 2535.774 kb on - strand, within DVU2432 at 2535.774 kb on - strand, within DVU2432 at 2535.779 kb on - strand, within DVU2432 at 2536.004 kb on - strand, within DVU2432 at 2536.095 kb on + strand, within DVU2432 at 2536.137 kb on + strand, within DVU2432 at 2536.208 kb on - strand, within DVU2432 at 2536.210 kb on + strand, within DVU2432 at 2536.241 kb on - strand, within DVU2432 at 2536.258 kb on + strand, within DVU2432 at 2536.258 kb on + strand, within DVU2432 at 2536.266 kb on - strand, within DVU2432 at 2536.266 kb on - strand, within DVU2432 at 2536.266 kb on - strand, within DVU2432 at 2536.306 kb on - strand, within DVU2432 at 2536.306 kb on - strand, within DVU2432 at 2536.398 kb on - strand, within DVU2432 at 2536.415 kb on - strand, within DVU2432 at 2536.421 kb on + strand, within DVU2432 at 2536.530 kb on + strand, within DVU2432 at 2536.530 kb on + strand, within DVU2432 at 2536.538 kb on - strand, within DVU2432 at 2536.538 kb on - strand, within DVU2432 at 2536.581 kb on - strand, within DVU2432 at 2536.615 kb on + strand, within DVU2432 at 2536.615 kb on + strand, within DVU2432 at 2536.623 kb on - strand, within DVU2432 at 2536.623 kb on - strand, within DVU2432 at 2536.717 kb on + strand, within DVU2432 at 2536.720 kb on - strand, within DVU2432 at 2536.722 kb on + strand, within DVU2432 at 2536.725 kb on - strand, within DVU2432 at 2536.725 kb on - strand, within DVU2432 at 2536.730 kb on - strand, within DVU2432 at 2536.756 kb on - strand, within DVU2432 at 2536.799 kb on + strand, within DVU2432 at 2536.819 kb on + strand, within DVU2432 at 2536.867 kb on + strand, within DVU2432 at 2536.901 kb on - strand, within DVU2432 at 2536.901 kb on - strand, within DVU2432 at 2536.990 kb on - strand, within DVU2432 at 2537.078 kb on - strand, within DVU2432 at 2537.151 kb on - strand, within DVU2432 at 2537.167 kb on + strand, within DVU2432 at 2537.175 kb on - strand, within DVU2432 at 2537.175 kb on - strand, within DVU2432 at 2537.255 kb on - strand, within DVU2432 at 2537.279 kb on - strand, within DVU2432 at 2537.331 kb on + strand, within DVU2432 at 2537.422 kb on + strand, within DVU2432 at 2537.489 kb on - strand, within DVU2432 at 2537.492 kb on + strand, within DVU2432 at 2537.515 kb on - strand, within DVU2432 at 2537.515 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.541 kb on - strand, within DVU2432 at 2537.661 kb on + strand at 2537.736 kb on - strand at 2537.781 kb on - strand at 2537.874 kb on + strand at 2537.874 kb on - strand at 2537.908 kb on - strand at 2537.971 kb on + strand at 2538.001 kb on + strand at 2538.038 kb on + strand at 2538.140 kb on + strand at 2538.209 kb on - strand at 2538.263 kb on - strand at 2538.306 kb on - strand at 2538.317 kb on + strand at 2538.367 kb on - strand at 2538.442 kb on + strand, within DVU2434 at 2538.473 kb on - strand, within DVU2434 at 2538.518 kb on + strand, within DVU2434 at 2538.523 kb on + strand, within DVU2434 at 2538.523 kb on + strand, within DVU2434 at 2538.526 kb on - strand, within DVU2434 at 2538.612 kb on - strand, within DVU2434 at 2538.682 kb on + strand, within DVU2434 at 2538.697 kb on - strand, within DVU2434 at 2538.764 kb on + strand at 2538.787 kb on - strand at 2538.798 kb on - strand at 2538.837 kb on + strand at 2538.845 kb on - strand at 2538.845 kb on - strand at 2538.845 kb on - strand at 2538.850 kb on - strand at 2538.850 kb on - strand at 2538.911 kb on + strand at 2538.937 kb on + strand at 2538.985 kb on + strand at 2539.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 2,532,795 - DVU2428 0.71 -1.0 2,532,808 - DVU2428 0.74 -0.9 2,532,808 - DVU2428 0.74 -1.6 2,532,819 + DVU2428 0.77 -0.9 2,532,864 - DVU2428 0.86 -0.7 2,532,886 - -0.7 2,532,966 + -0.2 2,532,966 + -0.2 2,533,002 + -0.1 2,533,010 - -0.1 2,533,077 - -0.9 2,533,127 - -0.3 2,533,138 + +0.3 2,533,252 - -1.1 2,533,397 + DVU2430 0.52 -0.3 2,533,412 - DVU2430 0.57 +0.9 2,533,438 + DVU2430 0.67 -0.2 2,533,444 - DVU2430 0.69 -0.7 2,533,451 - DVU2430 0.72 -0.1 2,533,477 + DVU2430 0.82 -2.3 2,533,493 + DVU2430 0.88 +0.2 2,533,616 + +0.6 2,533,701 + DVU2431 0.58 -1.1 2,533,701 + DVU2431 0.58 -0.3 2,533,707 + DVU2431 0.62 +0.1 2,533,707 + DVU2431 0.62 +0.4 2,533,709 - DVU2431 0.63 -0.5 2,533,709 - DVU2431 0.63 +0.2 2,533,721 - DVU2431 0.71 +0.3 2,533,768 - -0.0 2,533,801 - -0.2 2,533,816 - +0.6 2,533,823 - -0.4 2,533,829 + -0.4 2,533,884 - +0.4 2,533,886 - -0.1 2,533,890 + +0.9 2,533,957 + +0.2 2,534,050 - -0.6 2,534,175 - -0.3 2,534,175 - +1.0 2,534,192 + -0.9 2,534,192 + +0.2 2,534,202 + +0.1 2,534,210 - -0.3 2,534,229 + DVU2432 0.10 +0.3 2,534,249 - DVU2432 0.11 -1.1 2,534,303 - DVU2432 0.12 -0.0 2,534,350 - DVU2432 0.13 -0.4 2,534,526 - DVU2432 0.17 +0.5 2,534,538 - DVU2432 0.18 +0.6 2,534,635 + DVU2432 0.20 +1.8 2,534,643 - DVU2432 0.20 -0.3 2,534,656 - DVU2432 0.20 +0.3 2,534,658 + DVU2432 0.21 +0.5 2,534,850 + DVU2432 0.25 -0.3 2,534,882 - DVU2432 0.26 +0.9 2,534,910 + DVU2432 0.26 -0.0 2,535,086 - DVU2432 0.31 +1.2 2,535,147 + DVU2432 0.32 +0.1 2,535,173 - DVU2432 0.33 +0.0 2,535,184 + DVU2432 0.33 +0.1 2,535,198 - DVU2432 0.33 +0.3 2,535,247 + DVU2432 0.34 +0.9 2,535,248 + DVU2432 0.34 +0.3 2,535,364 + DVU2432 0.37 +1.2 2,535,384 + DVU2432 0.38 -0.6 2,535,424 + DVU2432 0.39 -0.3 2,535,473 + DVU2432 0.40 +0.7 2,535,478 + DVU2432 0.40 +0.1 2,535,590 + DVU2432 0.43 +0.4 2,535,625 + DVU2432 0.43 -0.5 2,535,625 + DVU2432 0.43 +0.1 2,535,774 - DVU2432 0.47 -0.1 2,535,774 - DVU2432 0.47 -0.5 2,535,779 - DVU2432 0.47 +0.6 2,536,004 - DVU2432 0.52 -0.8 2,536,095 + DVU2432 0.54 +1.8 2,536,137 + DVU2432 0.55 +0.0 2,536,208 - DVU2432 0.57 +0.8 2,536,210 + DVU2432 0.57 +0.1 2,536,241 - DVU2432 0.58 -0.5 2,536,258 + DVU2432 0.58 -1.8 2,536,258 + DVU2432 0.58 +0.1 2,536,266 - DVU2432 0.58 -0.1 2,536,266 - DVU2432 0.58 -0.2 2,536,266 - DVU2432 0.58 -1.8 2,536,306 - DVU2432 0.59 +0.1 2,536,306 - DVU2432 0.59 -0.1 2,536,398 - DVU2432 0.62 +2.5 2,536,415 - DVU2432 0.62 +1.0 2,536,421 + DVU2432 0.62 -0.9 2,536,530 + DVU2432 0.65 +0.0 2,536,530 + DVU2432 0.65 +0.2 2,536,538 - DVU2432 0.65 -0.4 2,536,538 - DVU2432 0.65 -1.6 2,536,581 - DVU2432 0.66 +0.1 2,536,615 + DVU2432 0.67 +0.0 2,536,615 + DVU2432 0.67 +0.1 2,536,623 - DVU2432 0.67 +0.1 2,536,623 - DVU2432 0.67 -0.3 2,536,717 + DVU2432 0.69 -1.0 2,536,720 - DVU2432 0.69 -0.1 2,536,722 + DVU2432 0.69 +0.0 2,536,725 - DVU2432 0.69 +0.2 2,536,725 - DVU2432 0.69 -0.2 2,536,730 - DVU2432 0.69 -0.1 2,536,756 - DVU2432 0.70 +0.8 2,536,799 + DVU2432 0.71 +0.1 2,536,819 + DVU2432 0.71 -0.1 2,536,867 + DVU2432 0.73 +0.6 2,536,901 - DVU2432 0.73 +0.1 2,536,901 - DVU2432 0.73 -0.9 2,536,990 - DVU2432 0.76 +0.1 2,537,078 - DVU2432 0.78 +0.5 2,537,151 - DVU2432 0.79 +0.1 2,537,167 + DVU2432 0.80 +0.1 2,537,175 - DVU2432 0.80 +0.7 2,537,175 - DVU2432 0.80 +0.4 2,537,255 - DVU2432 0.82 -0.3 2,537,279 - DVU2432 0.82 +1.0 2,537,331 + DVU2432 0.84 +0.1 2,537,422 + DVU2432 0.86 -0.1 2,537,489 - DVU2432 0.87 +0.2 2,537,492 + DVU2432 0.87 -0.0 2,537,515 - DVU2432 0.88 -0.1 2,537,515 - DVU2432 0.88 +0.2 2,537,541 - DVU2432 0.88 +0.1 2,537,541 - DVU2432 0.88 -1.3 2,537,541 - DVU2432 0.88 -2.3 2,537,661 + -0.9 2,537,736 - -0.2 2,537,781 - +0.6 2,537,874 + -1.6 2,537,874 - -1.1 2,537,908 - -0.1 2,537,971 + +0.1 2,538,001 + +0.3 2,538,038 + -0.6 2,538,140 + -1.0 2,538,209 - -1.0 2,538,263 - +0.3 2,538,306 - -0.2 2,538,317 + -0.3 2,538,367 - -0.7 2,538,442 + DVU2434 0.18 -0.5 2,538,473 - DVU2434 0.26 -0.9 2,538,518 + DVU2434 0.37 -0.2 2,538,523 + DVU2434 0.38 -1.2 2,538,523 + DVU2434 0.38 -0.6 2,538,526 - DVU2434 0.39 -0.4 2,538,612 - DVU2434 0.60 -1.4 2,538,682 + DVU2434 0.77 -0.6 2,538,697 - DVU2434 0.81 -0.2 2,538,764 + -0.4 2,538,787 - -1.3 2,538,798 - -1.6 2,538,837 + -0.7 2,538,845 - -0.5 2,538,845 - -0.8 2,538,845 - -0.0 2,538,850 - -0.8 2,538,850 - -1.2 2,538,911 + -0.7 2,538,937 + +0.2 2,538,985 + +0.4 2,539,018 - +0.2
Or see this region's nucleotide sequence