Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4797
Experiment: Nitrate reduction, replicate A t2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate A t2 |
|---|---|---|---|---|---|
| remove | |||||
| 5,298,932 | + | Pf1N1B4_4796 | 0.58 | +0.0 | |
| 5,298,933 | - | +0.0 | |||
| 5,299,024 | + | Pf1N1B4_4796 | 0.68 | -2.9 | |
| 5,299,281 | + | -1.8 | |||
| 5,299,297 | + | -1.1 | |||
| 5,299,298 | - | +0.0 | |||
| 5,299,502 | - | Pf1N1B4_4797 | 0.16 | +0.0 | |
| 5,299,585 | + | Pf1N1B4_4797 | 0.24 | +0.0 | |
| 5,299,585 | + | Pf1N1B4_4797 | 0.24 | -2.1 | |
| 5,300,079 | + | +0.0 | |||
| 5,300,079 | + | +0.0 | |||
| 5,300,192 | - | Pf1N1B4_4797 | 0.83 | -3.7 | |
| 5,300,259 | + | Pf1N1B4_4797 | 0.89 | -2.9 | |
| 5,300,259 | + | +0.0 | |||
| 5,300,365 | + | -2.8 | |||
| 5,300,642 | - | Pf1N1B4_4798 | 0.14 | +0.0 | |
| 5,300,974 | - | Pf1N1B4_4798 | 0.62 | +0.0 | |
| 5,301,255 | + | +0.0 |
Or see this region's nucleotide sequence