Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4740

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
5,235,914	-		Pf1N1B4_4738	0.79	+0.0
5,235,927	+		Pf1N1B4_4738	0.81	+0.0
5,236,109	+		Pf1N1B4_4739	0.16	-2.0
5,236,109	+		Pf1N1B4_4739	0.16	-2.9
5,236,122	-		Pf1N1B4_4739	0.18	+0.0
5,236,122	-		Pf1N1B4_4739	0.18	+0.0
5,236,400	+		Pf1N1B4_4739	0.67	-4.9
5,236,400	+		Pf1N1B4_4739	0.67	-3.0
5,236,400	+		Pf1N1B4_4739	0.67	-2.7
5,236,401	-		Pf1N1B4_4739	0.67	-2.6
5,236,418	+		Pf1N1B4_4739	0.70	+0.0
5,236,419	-		Pf1N1B4_4739	0.71	+0.0
5,236,473	+		Pf1N1B4_4739	0.80	-3.8
5,236,474	-		Pf1N1B4_4739	0.80	+0.0
5,236,474	-				-3.3
5,236,474	-		Pf1N1B4_4739	0.80	-3.1
5,236,474	-		Pf1N1B4_4739	0.80	-2.8
5,236,475	+		Pf1N1B4_4739	0.80	+0.0
5,236,476	-		Pf1N1B4_4739	0.81	+0.0
5,236,756	+				-1.8
5,237,184	+		Pf1N1B4_4740	0.23	-2.7
5,237,513	+		Pf1N1B4_4740	0.43	+0.0
5,237,919	-		Pf1N1B4_4740	0.67	-3.9
5,237,919	-		Pf1N1B4_4740	0.67	+0.0
5,237,966	+				-1.2
5,237,966	+		Pf1N1B4_4740	0.70	+0.0
5,238,379	+				-1.5
5,238,379	+				+0.0
5,238,480	+				-2.3
5,238,541	+				-1.0
5,238,687	-				-4.1
5,238,687	-				+0.0
5,238,693	+				-3.1
5,238,693	+				-1.7
5,238,836	-		Pf1N1B4_4741	0.11	-2.1
5,238,883	+		Pf1N1B4_4741	0.17	+0.0
5,238,883	+				+0.0
5,238,886	+		Pf1N1B4_4741	0.17	+0.0
5,238,886	+				-1.2
5,239,072	+		Pf1N1B4_4741	0.40	+0.0
5,239,174	+		Pf1N1B4_4741	0.52	-2.1
5,239,174	+		Pf1N1B4_4741	0.52	+0.0
5,239,174	+				-3.2
5,239,346	+		Pf1N1B4_4741	0.73	-1.5
5,239,355	+				+0.0