Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4588
Experiment: Nitrate reduction, replicate A t2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Nitrate reduction, replicate A t2 |
|---|---|---|---|---|---|
| remove | |||||
| 5,057,759 | + | Pf1N1B4_4586 | 0.81 | -1.2 | |
| 5,057,842 | + | -5.0 | |||
| 5,058,126 | + | Pf1N1B4_4587 | 0.51 | -1.6 | |
| 5,058,126 | + | Pf1N1B4_4587 | 0.51 | -2.9 | |
| 5,058,126 | + | Pf1N1B4_4587 | 0.51 | +0.1 | |
| 5,058,127 | - | Pf1N1B4_4587 | 0.51 | -1.7 | |
| 5,058,270 | - | Pf1N1B4_4587 | 0.85 | +0.1 | |
| 5,058,270 | - | +0.1 | |||
| 5,058,371 | + | +0.1 | |||
| 5,058,445 | + | -2.3 | |||
| 5,058,445 | + | +0.1 | |||
| 5,058,446 | - | +0.1 |
Or see this region's nucleotide sequence