Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4065

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
4,519,287	+				-3.2
4,519,296	+				-2.9
4,519,296	+				-0.0
4,519,296	+				-0.0
4,519,297	-				-2.6
4,519,333	+				-1.0
4,519,333	+				-0.0
4,519,408	+				-0.0
4,519,408	+				-0.0
4,519,741	-		Pf1N1B4_4065	0.32	-0.0
4,519,834	+		Pf1N1B4_4065	0.39	-0.0
4,519,834	+		Pf1N1B4_4065	0.39	-0.0
4,519,834	+				-5.6
4,519,834	+		Pf1N1B4_4065	0.39	-0.0
4,519,834	+		Pf1N1B4_4065	0.39	-0.0
4,519,834	+		Pf1N1B4_4065	0.39	-0.0
4,519,834	+		Pf1N1B4_4065	0.39	-3.8
4,519,835	-		Pf1N1B4_4065	0.39	-4.7
4,519,835	-		Pf1N1B4_4065	0.39	-2.3
4,519,835	-		Pf1N1B4_4065	0.39	-0.0
4,519,835	-		Pf1N1B4_4065	0.39	-0.0
4,519,835	-		Pf1N1B4_4065	0.39	-0.0
4,520,028	+		Pf1N1B4_4065	0.53	-0.0
4,520,028	+		Pf1N1B4_4065	0.53	-2.8
4,520,028	+		Pf1N1B4_4065	0.53	-0.0
4,520,028	+		Pf1N1B4_4065	0.53	-0.0
4,520,028	+		Pf1N1B4_4065	0.53	-4.8
4,520,028	+		Pf1N1B4_4065	0.53	-0.0
4,520,029	-		Pf1N1B4_4065	0.53	-3.6
4,520,029	-		Pf1N1B4_4065	0.53	-0.0
4,520,088	+		Pf1N1B4_4065	0.57	-4.8
4,520,088	+		Pf1N1B4_4065	0.57	-0.0
4,520,088	+		Pf1N1B4_4065	0.57	-5.6
4,520,088	+		Pf1N1B4_4065	0.57	-0.0
4,520,088	+		Pf1N1B4_4065	0.57	-3.7
4,520,204	+		Pf1N1B4_4065	0.66	-5.0
4,520,205	-		Pf1N1B4_4065	0.66	-0.0
4,520,304	+		Pf1N1B4_4065	0.73	-0.0
4,520,433	+		Pf1N1B4_4065	0.82	-0.0
4,520,433	+		Pf1N1B4_4065	0.82	-0.0
4,520,433	+		Pf1N1B4_4065	0.82	-4.1
4,520,433	+		Pf1N1B4_4065	0.82	-0.0
4,520,433	+		Pf1N1B4_4065	0.82	-0.0
4,520,433	+		Pf1N1B4_4065	0.82	-0.0
4,520,434	-		Pf1N1B4_4065	0.82	-0.0
4,520,596	+				-0.0
4,520,596	+				-3.7
4,520,596	+				-2.1
4,520,596	+				-2.9
4,520,596	+				-0.0
4,520,596	+				-2.5
4,520,596	+				-0.0
4,520,596	+				-0.0
4,520,597	-				-4.1
4,520,597	-				-0.0
4,520,597	-				-3.9
4,520,727	-				-0.0
4,520,949	-		Pf1N1B4_4066	0.12	-2.6
4,520,949	-		Pf1N1B4_4066	0.12	-0.0
4,520,951	+		Pf1N1B4_4066	0.13	-3.2
4,520,952	-		Pf1N1B4_4066	0.13	-0.0
4,520,952	-		Pf1N1B4_4066	0.13	-0.0
4,520,952	-		Pf1N1B4_4066	0.13	-0.0
4,520,952	-		Pf1N1B4_4066	0.13	-0.0
4,521,006	-		Pf1N1B4_4066	0.18	-0.0
4,521,006	-		Pf1N1B4_4066	0.18	-1.8
4,521,080	+		Pf1N1B4_4066	0.25	-1.7
4,521,080	+		Pf1N1B4_4066	0.25	-1.9
4,521,080	+		Pf1N1B4_4066	0.25	-4.6
4,521,081	-		Pf1N1B4_4066	0.26	-1.9
4,521,200	-				-0.0
4,521,221	+		Pf1N1B4_4066	0.40	-1.7
4,521,222	-		Pf1N1B4_4066	0.40	-0.0
4,521,222	-		Pf1N1B4_4066	0.40	-0.0
4,521,479	+		Pf1N1B4_4066	0.65	-0.0
4,521,662	+				-1.1
4,521,663	-		Pf1N1B4_4066	0.83	-3.2