Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3632

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
4,039,669	-				-1.4
4,039,868	+				-0.0
4,039,868	+				-0.4
4,039,868	+				-2.1
4,039,868	+				-2.7
4,039,868	+				-0.0
4,039,869	-				-2.2
4,039,869	-				-0.0
4,039,921	+				-0.0
4,039,921	+				-0.0
4,040,179	+		Pf1N1B4_3631	0.43	-5.5
4,040,180	-		Pf1N1B4_3631	0.43	-0.0
4,040,431	+		Pf1N1B4_3631	0.77	-1.1
4,040,431	+		Pf1N1B4_3631	0.77	-0.0
4,040,431	+				-0.0
4,040,431	+		Pf1N1B4_3631	0.77	-1.3
4,040,432	-		Pf1N1B4_3631	0.77	-0.0
4,040,432	-		Pf1N1B4_3631	0.77	-0.0
4,040,432	-		Pf1N1B4_3631	0.77	-0.0
4,040,432	-				-1.5
4,040,432	-				-0.0
4,040,456	+		Pf1N1B4_3631	0.80	-0.7
4,040,646	-				-0.0
4,040,646	-				-0.0
4,040,685	+				-0.2
4,040,686	-				-0.0
4,040,716	+				-2.5
4,040,717	-		Pf1N1B4_3632	0.12	-2.6
4,040,746	+		Pf1N1B4_3632	0.15	-2.2
4,040,746	+				-0.0
4,040,746	+		Pf1N1B4_3632	0.15	-3.0
4,040,747	-		Pf1N1B4_3632	0.15	-1.0
4,040,747	-		Pf1N1B4_3632	0.15	-0.0
4,041,015	+		Pf1N1B4_3632	0.45	-2.2
4,041,081	+		Pf1N1B4_3632	0.52	-0.0
4,041,359	+		Pf1N1B4_3632	0.83	-2.9
4,041,359	+		Pf1N1B4_3632	0.83	-0.0
4,041,497	+				-1.4
4,041,500	+				-0.0
4,041,500	+				-0.0
4,041,501	-				-0.0
4,041,501	-				-0.0
4,041,501	-				-0.0
4,041,501	-				-0.0
4,041,501	-				-0.0
4,041,501	-				-0.0
4,041,510	+				-0.0
4,041,510	+				-0.0
4,041,511	-				-1.7
4,041,511	-				-0.0
4,041,511	-				-0.0
4,042,193	+		Pf1N1B4_3633	0.81	-3.7
4,042,193	+				-0.0
4,042,193	+		Pf1N1B4_3633	0.81	-0.0
4,042,194	-		Pf1N1B4_3633	0.81	-0.0
4,042,442	+				-4.9
4,042,442	+				-1.6
4,042,443	-				-0.0