Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3337

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
3,723,327	+				+0.0
3,723,327	+				-3.2
3,723,377	+				-2.9
3,723,485	+				+0.0
3,723,485	+				-2.6
3,723,485	+				+0.0
3,723,485	+				-2.0
3,723,485	+				+0.0
3,723,485	+				-3.8
3,723,485	+				+0.0
3,723,487	+				+0.0
3,723,487	+				+0.0
3,723,487	+				-2.3
3,723,487	+				+0.0
3,723,499	+				-1.8
3,723,511	+				-1.8
3,723,606	+				-2.6
3,723,615	+				+0.0
3,723,636	+				+0.0
3,723,655	+				-2.5
3,723,655	+				-1.8
3,723,656	-				+0.0
3,723,656	-				-1.6
3,723,671	+				-2.5
3,723,671	+				+0.0
3,723,672	-				+0.0
3,723,672	-				-2.3
3,723,672	-				-2.6
3,723,672	-				-2.2
3,723,703	-				-2.2
3,723,703	-				+0.0
3,723,713	+				+0.0
3,723,756	+				+0.0
3,723,756	+				-3.0
3,723,756	+				-2.6
3,723,757	-				-2.1
3,723,757	-				+0.0
3,723,757	-				-0.9
3,723,816	+				+0.0
3,723,816	+				+0.0
3,723,817	-				+0.0
3,723,817	-				+0.0
3,723,924	+		Pf1N1B4_3336	0.58	+0.0
3,723,924	+		Pf1N1B4_3336	0.58	-1.2
3,723,924	+		Pf1N1B4_3336	0.58	+0.0
3,723,924	+		Pf1N1B4_3336	0.58	-2.5
3,723,924	+				+0.0
3,723,924	+				+0.0
3,723,924	+		Pf1N1B4_3336	0.58	+0.0
3,723,925	-		Pf1N1B4_3336	0.58	+0.0
3,723,925	-		Pf1N1B4_3336	0.58	-0.5
3,723,925	-		Pf1N1B4_3336	0.58	-4.0
3,723,925	-		Pf1N1B4_3336	0.58	+0.0
3,723,925	-				-1.9
3,723,925	-		Pf1N1B4_3336	0.58	+0.0
3,723,925	-		Pf1N1B4_3336	0.58	-1.3
3,723,925	-		Pf1N1B4_3336	0.58	-1.3
3,723,925	-		Pf1N1B4_3336	0.58	+0.0
3,724,000	+				+0.0
3,724,000	+				+0.0
3,724,000	+				+0.0
3,724,000	+				-1.4
3,724,000	+				-2.8
3,724,001	-				-3.0
3,724,001	-				+0.0
3,724,001	-				+0.0
3,724,002	+				-3.5
3,724,002	+				+0.0
3,724,002	+				-1.3
3,724,002	+				-1.3
3,724,002	+				-1.9
3,724,002	+				+0.0
3,724,002	+				+0.0
3,724,002	+				-1.1
3,724,002	+				-1.0
3,724,002	+				-4.4
3,724,002	+				+0.0
3,724,002	+				+0.0
3,724,002	+				+0.0
3,724,002	+				+0.0
3,724,002	+				-1.3
3,724,002	+				-2.6
3,724,003	-				-0.7
3,724,003	-				-1.8
3,724,003	-				+0.0
3,724,003	-				+0.0
3,724,003	-				+0.0
3,724,003	-				+0.0
3,724,003	-				+0.0
3,724,003	-				-3.1
3,724,003	-				+0.0
3,724,003	-				+0.0
3,724,063	-				-2.3
3,724,064	+				-2.7
3,724,064	+				-1.8
3,724,064	+				-1.9
3,724,064	+				-4.2
3,724,064	+				+0.0
3,724,064	+				+0.0
3,724,064	+				-1.6
3,724,065	-				+0.0
3,724,065	-				+0.0
3,724,065	-				+0.0
3,724,065	-				+0.0
3,724,065	-				-1.7
3,724,065	-				+0.0
3,724,065	-				+0.0
3,724,065	-				+0.0
3,724,065	-				-0.8
3,724,109	+				-1.5
3,724,109	+				+0.0
3,724,110	-				+0.0
3,724,110	-				-2.3
3,724,110	-				+0.0
3,724,110	-				+0.0
3,724,110	-				+0.0
3,724,580	-		Pf1N1B4_3337	0.44	+0.0
3,724,626	+		Pf1N1B4_3337	0.49	-2.9
3,724,626	+		Pf1N1B4_3337	0.49	-2.5
3,724,626	+		Pf1N1B4_3337	0.49	+0.0
3,724,626	+		Pf1N1B4_3337	0.49	-1.6
3,724,692	+		Pf1N1B4_3337	0.56	+0.0
3,724,692	+		Pf1N1B4_3337	0.56	-2.0
3,724,693	-		Pf1N1B4_3337	0.56	+0.0
3,724,738	+		Pf1N1B4_3337	0.61	+0.0
3,724,738	+		Pf1N1B4_3337	0.61	-1.8
3,724,738	+		Pf1N1B4_3337	0.61	-3.9
3,724,738	+		Pf1N1B4_3337	0.61	+0.0
3,724,738	+		Pf1N1B4_3337	0.61	-2.3
3,724,821	+		Pf1N1B4_3337	0.70	-4.0
3,724,821	+		Pf1N1B4_3337	0.70	+0.0
3,724,821	+				+0.0
3,724,833	-		Pf1N1B4_3337	0.72	+0.0
3,724,833	-		Pf1N1B4_3337	0.72	-3.9
3,724,909	+		Pf1N1B4_3337	0.80	-2.4
3,725,111	+				+0.0
3,725,111	+				+0.0
3,725,111	+				+0.0
3,725,111	+				-2.5
3,725,111	+				+0.0
3,725,111	+				+0.0
3,725,111	+				-1.5
3,725,112	-				-2.8
3,725,112	-				-2.2
3,725,112	-				+0.0
3,725,112	-				+0.0
3,725,112	-				+0.0
3,725,112	-				-1.4
3,725,113	+				-2.1
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-2.8
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-1.9
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-3.1
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-1.4
3,725,113	+				+0.0
3,725,113	+				-1.5
3,725,113	+				-2.7
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-1.9
3,725,113	+				+0.0
3,725,113	+				-2.5
3,725,113	+				+0.0
3,725,113	+				+0.0
3,725,113	+				-1.8
3,725,113	+				+0.0
3,725,113	+				-3.5
3,725,113	+				+0.0
3,725,114	-				-1.6
3,725,114	-				+0.0
3,725,114	-				-1.8
3,725,114	-				-3.9
3,725,114	-				-1.0
3,725,114	-				+0.0
3,725,114	-				+0.0
3,725,114	-				-2.9
3,725,114	-				+0.0
3,725,114	-				+0.0
3,725,114	-				-1.8
3,725,114	-				+0.0
3,725,114	-				+0.0
3,725,114	-				-2.8
3,725,114	-				+0.0
3,725,117	+				+0.0
3,725,117	+				-2.4
3,725,118	-				-0.9
3,725,172	+				+0.0
3,725,172	+				+0.0
3,725,172	+				-3.3
3,725,172	+				+0.0
3,725,173	-				-1.5
3,725,490	+				+0.0
3,725,490	+				+0.0
3,725,491	-				-2.2
3,725,491	-				+0.0
3,725,491	-				+0.0
3,725,747	+		Pf1N1B4_3339	0.24	+0.0
3,725,749	+		Pf1N1B4_3339	0.24	-1.9
3,725,750	-		Pf1N1B4_3339	0.25	+0.0
3,725,750	-		Pf1N1B4_3339	0.25	+0.0
3,725,769	+		Pf1N1B4_3339	0.27	+0.0
3,725,769	+		Pf1N1B4_3339	0.27	+0.0
3,725,769	+		Pf1N1B4_3339	0.27	-3.1
3,725,770	-		Pf1N1B4_3339	0.27	-2.2
3,725,813	+		Pf1N1B4_3339	0.31	+0.0
3,725,813	+		Pf1N1B4_3339	0.31	+0.0
3,725,813	+		Pf1N1B4_3339	0.31	+0.0
3,725,814	-		Pf1N1B4_3339	0.31	-1.6