Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3270

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
3,659,185	+		Pf1N1B4_3269	0.25	-0.0
3,659,195	+		Pf1N1B4_3269	0.26	-0.0
3,659,210	+		Pf1N1B4_3269	0.27	-0.0
3,659,210	+		Pf1N1B4_3269	0.27	-0.0
3,659,211	-		Pf1N1B4_3269	0.28	-0.6
3,659,211	-		Pf1N1B4_3269	0.28	-1.4
3,659,295	+		Pf1N1B4_3269	0.36	-0.0
3,659,295	+		Pf1N1B4_3269	0.36	-3.8
3,659,296	-		Pf1N1B4_3269	0.36	-0.0
3,659,296	-		Pf1N1B4_3269	0.36	-1.5
3,659,296	-		Pf1N1B4_3269	0.36	-1.4
3,659,347	-		Pf1N1B4_3269	0.41	-0.0
3,659,396	+		Pf1N1B4_3269	0.46	-0.0
3,659,396	+		Pf1N1B4_3269	0.46	-0.0
3,659,397	-				-0.8
3,659,501	+		Pf1N1B4_3269	0.56	-1.0
3,659,502	-		Pf1N1B4_3269	0.56	-0.0
3,659,502	-		Pf1N1B4_3269	0.56	-0.0
3,659,502	-		Pf1N1B4_3269	0.56	-2.9
3,659,516	+		Pf1N1B4_3269	0.57	-0.0
3,659,516	+		Pf1N1B4_3269	0.57	-1.7
3,659,516	+		Pf1N1B4_3269	0.57	-0.0
3,659,645	+		Pf1N1B4_3269	0.70	-0.0
3,659,648	+		Pf1N1B4_3269	0.70	-2.0
3,659,994	+				-0.0
3,659,994	+				-1.0
3,660,114	+				-0.0
3,660,114	+				-0.0
3,660,115	-				-0.0
3,660,115	-				-0.4
3,660,187	+				-0.7
3,660,187	+				+0.3
3,660,188	-				-1.0
3,660,188	-				-0.0
3,660,188	-				-0.0
3,660,460	+		Pf1N1B4_3270	0.31	-0.0
3,660,460	+		Pf1N1B4_3270	0.31	+0.2
3,660,710	-		Pf1N1B4_3270	0.53	-0.9
3,660,778	-		Pf1N1B4_3270	0.58	-0.0
3,660,835	+		Pf1N1B4_3270	0.63	-0.9
3,660,836	-		Pf1N1B4_3270	0.64	-0.5
3,660,836	-		Pf1N1B4_3270	0.64	+0.1
3,660,836	-		Pf1N1B4_3270	0.64	-0.0
3,660,883	+		Pf1N1B4_3270	0.68	-0.5
3,660,884	-		Pf1N1B4_3270	0.68	-0.0
3,660,884	-		Pf1N1B4_3270	0.68	-0.0
3,660,884	-		Pf1N1B4_3270	0.68	-0.0
3,660,919	+		Pf1N1B4_3270	0.71	-0.0
3,660,919	+		Pf1N1B4_3270	0.71	-0.0
3,660,919	+		Pf1N1B4_3270	0.71	+0.1
3,660,920	-		Pf1N1B4_3270	0.71	-0.0
3,660,920	-		Pf1N1B4_3270	0.71	-0.0
3,661,121	+		Pf1N1B4_3270	0.88	-0.0
3,661,121	+		Pf1N1B4_3270	0.88	-0.8
3,661,121	+		Pf1N1B4_3270	0.88	-1.4
3,661,252	+				-0.0
3,661,252	+				-2.4
3,661,252	+				-0.0
3,661,252	+				-0.0
3,661,253	-				-0.0
3,661,253	-				-0.0
3,661,253	-				-0.0
3,661,253	-				-2.3
3,661,253	-				-0.0
3,661,253	-				-1.8
3,661,253	-				-0.0
3,661,282	-				-0.0
3,661,282	-				+0.6
3,661,317	+				-2.5
3,661,351	-				-0.0
3,661,421	-		Pf1N1B4_3271	0.15	-0.0
3,661,527	+		Pf1N1B4_3271	0.24	-0.0
3,661,527	+		Pf1N1B4_3271	0.24	-0.0
3,661,527	+		Pf1N1B4_3271	0.24	-0.0
3,661,528	-		Pf1N1B4_3271	0.24	-0.0
3,661,536	-		Pf1N1B4_3271	0.24	-0.0
3,661,536	-		Pf1N1B4_3271	0.24	-0.0
3,661,603	-		Pf1N1B4_3271	0.30	-4.0
3,661,660	+		Pf1N1B4_3271	0.35	-0.0
3,661,661	-		Pf1N1B4_3271	0.35	-0.0
3,661,661	-		Pf1N1B4_3271	0.35	-0.0
3,661,828	+		Pf1N1B4_3271	0.49	-0.0
3,661,931	-		Pf1N1B4_3271	0.58	-0.0
3,661,931	-		Pf1N1B4_3271	0.58	-0.0
3,661,931	-		Pf1N1B4_3271	0.58	-0.0
3,661,931	-		Pf1N1B4_3271	0.58	-0.0
3,661,931	-		Pf1N1B4_3271	0.58	-0.0
3,661,979	-		Pf1N1B4_3271	0.62	-0.0
3,662,179	+		Pf1N1B4_3271	0.80	-0.0
3,662,179	+		Pf1N1B4_3271	0.80	-1.8
3,662,179	+		Pf1N1B4_3271	0.80	-0.0
3,662,180	-		Pf1N1B4_3271	0.80	-2.7
3,662,180	-		Pf1N1B4_3271	0.80	-0.0
3,662,180	-				-0.0
3,662,180	-		Pf1N1B4_3271	0.80	-0.0
3,662,180	-		Pf1N1B4_3271	0.80	-0.0
3,662,184	-		Pf1N1B4_3271	0.80	-0.0