Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3078

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
3,460,997	-				-0.0
3,461,020	-				-0.0
3,461,020	-				-0.0
3,461,020	-				-2.3
3,461,038	-				-0.0
3,461,038	-				-1.2
3,461,038	-				-0.0
3,461,038	-				-0.0
3,461,042	-				-1.8
3,461,042	-				-0.0
3,461,042	-				-2.1
3,461,042	-				-2.8
3,461,042	-				-0.0
3,461,042	-				-0.0
3,461,042	-				-0.0
3,461,269	-		Pf1N1B4_3078	0.69	-0.0
3,461,269	-		Pf1N1B4_3078	0.69	-3.7
3,461,269	-		Pf1N1B4_3078	0.69	-0.0
3,461,269	-		Pf1N1B4_3078	0.69	-3.9
3,461,284	-		Pf1N1B4_3078	0.73	-0.0
3,461,284	-		Pf1N1B4_3078	0.73	-0.0
3,461,410	+				-3.7
3,461,411	-				-0.0
3,461,411	-				-2.0
3,461,411	-				-0.0
3,461,425	+				-0.4
3,461,426	-				-1.8
3,461,426	-				-1.3
3,461,473	+				-0.0
3,461,473	+				-3.3
3,461,559	-				-2.9
3,461,559	-				-2.0
3,461,559	-				-1.6
3,461,591	+				-1.7
3,461,591	+				-0.0
3,461,591	+				-0.0
3,461,592	-				-2.7
3,461,592	-				-0.0
3,461,592	-				-0.0
3,461,691	-				-1.7
3,461,777	-		Pf1N1B4_3079	0.18	-2.6
3,461,777	-		Pf1N1B4_3079	0.18	-0.0
3,461,784	-		Pf1N1B4_3079	0.19	-3.5
3,461,785	+		Pf1N1B4_3079	0.19	-0.0
3,461,785	+		Pf1N1B4_3079	0.19	+1.4
3,461,785	+		Pf1N1B4_3079	0.19	-0.0
3,461,785	+		Pf1N1B4_3079	0.19	-0.0
3,461,786	-		Pf1N1B4_3079	0.19	-0.0
3,461,786	-		Pf1N1B4_3079	0.19	-0.0
3,461,786	-		Pf1N1B4_3079	0.19	-0.0
3,461,879	-		Pf1N1B4_3079	0.32	-0.0
3,461,879	-		Pf1N1B4_3079	0.32	-0.0
3,461,879	-		Pf1N1B4_3079	0.32	-0.0
3,461,891	+		Pf1N1B4_3079	0.33	-2.3
3,462,065	+		Pf1N1B4_3079	0.57	-0.0
3,462,065	+		Pf1N1B4_3079	0.57	-0.0
3,462,065	+		Pf1N1B4_3079	0.57	-2.1
3,462,066	-		Pf1N1B4_3079	0.57	-0.0
3,462,066	-		Pf1N1B4_3079	0.57	-0.0
3,462,066	-		Pf1N1B4_3079	0.57	-2.7
3,462,066	-		Pf1N1B4_3079	0.57	-2.0
3,462,066	-		Pf1N1B4_3079	0.57	-0.0
3,462,066	-		Pf1N1B4_3079	0.57	-0.0
3,462,066	-		Pf1N1B4_3079	0.57	-1.5
3,462,066	-		Pf1N1B4_3079	0.57	-1.6
3,462,069	-		Pf1N1B4_3079	0.58	-0.0
3,462,134	+		Pf1N1B4_3079	0.67	-2.5
3,462,136	+		Pf1N1B4_3079	0.67	-0.0
3,462,136	+		Pf1N1B4_3079	0.67	-0.0
3,462,136	+		Pf1N1B4_3079	0.67	-2.5
3,462,136	+		Pf1N1B4_3079	0.67	-0.0
3,462,136	+		Pf1N1B4_3079	0.67	-0.0
3,462,137	-		Pf1N1B4_3079	0.67	-2.0
3,462,200	+		Pf1N1B4_3079	0.76	-0.0
3,462,312	-				-2.4
3,462,322	+				-1.9
3,462,378	+				-2.3