Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2975

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
3,334,750	-				-1.1
3,334,849	-		Pf1N1B4_2974	0.18	-0.0
3,334,929	+		Pf1N1B4_2974	0.29	-1.4
3,334,929	+		Pf1N1B4_2974	0.29	-0.0
3,334,929	+		Pf1N1B4_2974	0.29	+1.0
3,334,930	-		Pf1N1B4_2974	0.30	-0.0
3,334,930	-		Pf1N1B4_2974	0.30	-1.3
3,334,930	-		Pf1N1B4_2974	0.30	-0.0
3,334,930	-		Pf1N1B4_2974	0.30	-2.6
3,334,930	-		Pf1N1B4_2974	0.30	-2.9
3,335,130	+		Pf1N1B4_2974	0.57	-3.7
3,335,378	-				-0.0
3,335,494	+				-2.8
3,335,494	+				-0.0
3,335,495	-				-0.0
3,335,508	+				-1.8
3,335,544	+				-2.4
3,335,544	+				-0.0
3,335,545	-				-2.4
3,335,545	-				-0.0
3,335,656	+		Pf1N1B4_2975	0.13	-0.0
3,335,657	-		Pf1N1B4_2975	0.13	-3.8
3,335,657	-		Pf1N1B4_2975	0.13	-0.0
3,335,806	-				-0.0
3,335,806	-		Pf1N1B4_2975	0.42	-0.0
3,335,834	+		Pf1N1B4_2975	0.47	-0.0
3,335,835	-		Pf1N1B4_2975	0.48	-0.0
3,336,060	+				-2.0
3,336,102	+				-0.0
3,336,147	+				-0.0
3,336,147	+				-0.0
3,336,147	+				-0.0
3,336,147	+				-0.0
3,336,147	+				-0.0
3,336,147	+				-2.2
3,336,148	-				-1.7
3,336,148	-				-4.2
3,336,169	+				-0.0
3,336,170	-				-2.7
3,336,356	-		Pf1N1B4_2976	0.12	-0.0
3,336,768	-		Pf1N1B4_2976	0.35	-0.0
3,336,867	+		Pf1N1B4_2976	0.40	-0.0
3,337,081	+		Pf1N1B4_2976	0.52	-3.3
3,337,081	+		Pf1N1B4_2976	0.52	-0.8
3,337,081	+		Pf1N1B4_2976	0.52	-3.7
3,337,081	+		Pf1N1B4_2976	0.52	-0.0
3,337,082	-		Pf1N1B4_2976	0.52	-0.0
3,337,082	-		Pf1N1B4_2976	0.52	-1.0