Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2184

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
2,496,072	+				+0.0
2,496,072	+				-0.5
2,496,073	-				+0.0
2,496,073	-				-2.7
2,496,172	-				+0.0
2,496,172	-				+0.0
2,496,172	-				+0.0
2,496,190	-				-1.8
2,496,209	-				+0.0
2,496,255	-				-2.7
2,496,255	-				-3.8
2,496,256	+				+0.0
2,496,256	+				+0.0
2,496,256	+				+0.0
2,496,256	+				-0.5
2,496,257	-				-2.8
2,496,257	-				-3.6
2,496,257	-				-2.5
2,496,257	-				-2.8
2,496,257	-				-2.9
2,496,257	-				+0.0
2,496,257	-				-2.5
2,496,277	+				+0.0
2,496,277	+				+0.0
2,496,277	+				-1.0
2,496,277	+				+0.0
2,496,277	+				-2.9
2,496,278	-				+0.0
2,496,278	-				+0.0
2,496,278	-				+0.0
2,496,278	-				+0.0
2,496,278	-				+0.0
2,496,278	-				+0.0
2,496,278	-				-3.9
2,496,278	-				-2.9
2,496,284	+				-2.7
2,496,284	+				+0.0
2,496,392	+				+0.0
2,496,393	-				-4.1
2,496,436	+				+0.0
2,496,478	+				+0.0
2,496,479	-				+0.0
2,496,479	-				+0.0
2,496,479	-				-3.1
2,496,554	+		Pf1N1B4_2184	0.10	-3.5
2,496,554	+		Pf1N1B4_2184	0.10	-3.8
2,496,554	+		Pf1N1B4_2184	0.10	+0.0
2,496,554	+		Pf1N1B4_2184	0.10	+0.0
2,496,554	+		Pf1N1B4_2184	0.10	-2.3
2,496,555	-		Pf1N1B4_2184	0.10	+0.0
2,496,555	-		Pf1N1B4_2184	0.10	+0.0
2,496,555	-		Pf1N1B4_2184	0.10	-4.9
2,496,555	-		Pf1N1B4_2184	0.10	+0.0
2,496,753	+		Pf1N1B4_2184	0.37	+0.0
2,496,804	+		Pf1N1B4_2184	0.44	+0.0
2,496,804	+		Pf1N1B4_2184	0.44	-2.5
2,496,804	+		Pf1N1B4_2184	0.44	+0.0
2,496,804	+		Pf1N1B4_2184	0.44	+0.0
2,496,805	-		Pf1N1B4_2184	0.44	+0.0
2,496,805	-		Pf1N1B4_2184	0.44	+0.0
2,496,816	+		Pf1N1B4_2184	0.45	+0.0
2,496,957	-		Pf1N1B4_2184	0.64	-4.9
2,496,957	-		Pf1N1B4_2184	0.64	+0.0
2,496,977	+		Pf1N1B4_2184	0.67	+0.0
2,496,977	+		Pf1N1B4_2184	0.67	+0.0
2,496,977	+		Pf1N1B4_2184	0.67	+0.0
2,496,977	+		Pf1N1B4_2184	0.67	-4.4
2,496,978	-		Pf1N1B4_2184	0.67	-4.7
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,496,978	-		Pf1N1B4_2184	0.67	+0.0
2,497,243	+				+0.0
2,497,243	+				+0.0
2,497,243	+				+0.0
2,497,244	-				+0.0
2,497,244	-				+0.0
2,497,244	-				+0.0
2,497,244	-				+0.0
2,497,286	+				+0.0
2,497,286	+				+0.0
2,497,286	+				+0.0
2,497,287	-				+0.0
2,497,287	-				-1.9
2,497,316	+				+0.0
2,497,316	+				+0.0
2,497,317	-				-1.7
2,497,319	+				+0.0
2,497,319	+				+0.0
2,497,319	+				-1.4
2,497,332	+				+0.0
2,497,332	+				+0.0
2,497,332	+				+0.0
2,497,332	+				-2.2
2,497,332	+				-2.2
2,497,332	+				+0.0