Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1367

Experiment: Nitrate reduction, replicate A t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A t2
1,564,101	-		Pf1N1B4_1365	0.58	-0.0
1,564,101	-		Pf1N1B4_1365	0.58	-2.7
1,564,166	+		Pf1N1B4_1365	0.79	-0.0
1,564,167	-		Pf1N1B4_1365	0.79	-0.0
1,564,167	-		Pf1N1B4_1365	0.79	-0.0
1,564,167	-		Pf1N1B4_1365	0.79	-2.4
1,564,232	+				-0.0
1,564,232	+				-1.7
1,564,232	+				-0.8
1,564,233	-				-0.0
1,564,233	-				-0.0
1,564,233	-				-0.0
1,564,233	-				-0.0
1,564,479	-		Pf1N1B4_1366	0.39	-0.0
1,564,479	-		Pf1N1B4_1366	0.39	-0.0
1,564,577	+		Pf1N1B4_1366	0.54	-3.6
1,564,577	+				-0.0
1,564,578	-		Pf1N1B4_1366	0.54	-0.0
1,564,578	-		Pf1N1B4_1366	0.54	-0.0
1,564,578	-				-0.0
1,564,989	+				-1.9
1,564,990	-				-0.0
1,565,459	-		Pf1N1B4_1367	0.49	-4.5
1,565,459	-		Pf1N1B4_1367	0.49	-0.0
1,565,494	+		Pf1N1B4_1367	0.53	-0.0
1,565,494	+		Pf1N1B4_1367	0.53	-0.0
1,565,494	+		Pf1N1B4_1367	0.53	-3.2
1,565,575	+		Pf1N1B4_1367	0.62	-0.0
1,565,575	+		Pf1N1B4_1367	0.62	-1.4
1,565,576	-		Pf1N1B4_1367	0.62	-2.5
1,565,576	-		Pf1N1B4_1367	0.62	-0.0
1,565,650	+		Pf1N1B4_1367	0.70	-0.0
1,565,650	+		Pf1N1B4_1367	0.70	-0.0
1,565,792	-		Pf1N1B4_1367	0.85	-0.0
1,565,792	-		Pf1N1B4_1367	0.85	-0.0
1,565,882	+				-0.0
1,565,882	+				-0.0
1,565,883	-				-0.0
1,565,932	+				-0.0
1,565,933	-				-0.0
1,565,964	+				-0.0
1,565,964	+				-0.0
1,565,964	+				-0.0
1,565,965	-				-0.0
1,565,965	-				-0.0
1,565,965	-				-1.4
1,566,006	-				-0.0
1,566,123	-				-0.0
1,566,139	+				-0.0
1,566,139	+				-0.0
1,566,140	-				-0.0
1,566,355	+		Pf1N1B4_1368	0.10	-0.0
1,566,355	+		Pf1N1B4_1368	0.10	-4.1
1,566,355	+		Pf1N1B4_1368	0.10	-0.0
1,566,355	+		Pf1N1B4_1368	0.10	-1.6
1,566,356	-		Pf1N1B4_1368	0.11	-0.0
1,566,356	-		Pf1N1B4_1368	0.11	-1.3
1,566,356	-		Pf1N1B4_1368	0.11	-0.0
1,566,356	-		Pf1N1B4_1368	0.11	-1.6
1,566,407	+		Pf1N1B4_1368	0.13	-0.0
1,566,408	-		Pf1N1B4_1368	0.13	-1.1
1,566,408	-		Pf1N1B4_1368	0.13	-0.0
1,566,408	-		Pf1N1B4_1368	0.13	-2.2
1,566,454	+		Pf1N1B4_1368	0.15	-1.9
1,566,454	+		Pf1N1B4_1368	0.15	-0.6
1,566,454	+		Pf1N1B4_1368	0.15	-0.0
1,566,454	+		Pf1N1B4_1368	0.15	-0.0
1,566,454	+		Pf1N1B4_1368	0.15	-0.0
1,566,454	+		Pf1N1B4_1368	0.15	-0.0
1,566,455	-		Pf1N1B4_1368	0.15	-1.4
1,566,455	-		Pf1N1B4_1368	0.15	-0.0
1,566,455	-		Pf1N1B4_1368	0.15	-2.1
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-3.4
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+				-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-0.0
1,566,580	+		Pf1N1B4_1368	0.21	-2.4
1,566,580	+		Pf1N1B4_1368	0.21	-1.9
1,566,581	-		Pf1N1B4_1368	0.21	-0.0
1,566,581	-		Pf1N1B4_1368	0.21	-0.0
1,566,581	-		Pf1N1B4_1368	0.21	-1.7
1,566,581	-		Pf1N1B4_1368	0.21	-0.0
1,566,581	-		Pf1N1B4_1368	0.21	-0.0
1,566,722	+		Pf1N1B4_1368	0.28	-1.7
1,566,722	+		Pf1N1B4_1368	0.28	-0.0
1,566,723	-		Pf1N1B4_1368	0.28	-0.0
1,566,765	+		Pf1N1B4_1368	0.30	-0.0
1,566,766	-		Pf1N1B4_1368	0.30	-1.1
1,566,766	-		Pf1N1B4_1368	0.30	-0.0
1,566,912	+		Pf1N1B4_1368	0.37	-3.2
1,566,925	+		Pf1N1B4_1368	0.38	-0.0
1,566,925	+				-2.0
1,566,925	+				-0.0
1,566,926	-		Pf1N1B4_1368	0.38	-0.0
1,566,926	-		Pf1N1B4_1368	0.38	-2.6
1,566,926	-		Pf1N1B4_1368	0.38	-0.2
1,566,926	-		Pf1N1B4_1368	0.38	-0.0
1,566,926	-		Pf1N1B4_1368	0.38	-0.0