Experiment: BHIS with Doxycycline hyclate 0.0001953125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0731 and BT0732 are separated by 202 nucleotides BT0732 and BT0733 are separated by 12 nucleotides BT0733 and BT0734 are separated by 268 nucleotides
BT0731: BT0731 - hypothetical protein (NCBI ptt file), at 905,267 to 905,803
BT0731
BT0732: BT0732 - two-component system response regulator (NCBI ptt file), at 906,006 to 906,701
BT0732
BT0733: BT0733 - two-component system sensor histidine kinase (NCBI ptt file), at 906,714 to 908,093
BT0733
BT0734: BT0734 - conserved hypothetical protein (NCBI ptt file), at 908,362 to 910,470
BT0734
Position (kb) 906
907
908
909 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 905.722 kb on + strand, within BT0731 at 905.786 kb on + strand at 905.787 kb on - strand at 905.943 kb on - strand at 905.973 kb on + strand at 906.007 kb on + strand at 906.055 kb on - strand at 906.055 kb on - strand at 906.280 kb on + strand, within BT0732 at 906.358 kb on - strand, within BT0732 at 906.499 kb on - strand, within BT0732 at 906.633 kb on - strand at 906.720 kb on - strand at 906.728 kb on + strand at 906.873 kb on + strand, within BT0733 at 906.900 kb on - strand, within BT0733 at 907.048 kb on - strand, within BT0733 at 907.086 kb on + strand, within BT0733 at 907.105 kb on - strand, within BT0733 at 907.233 kb on + strand, within BT0733 at 907.590 kb on - strand, within BT0733 at 907.619 kb on + strand, within BT0733 at 907.619 kb on + strand, within BT0733 at 907.624 kb on - strand, within BT0733 at 907.624 kb on - strand, within BT0733 at 907.665 kb on - strand, within BT0733 at 907.665 kb on - strand, within BT0733 at 907.665 kb on - strand, within BT0733 at 907.666 kb on + strand, within BT0733 at 907.668 kb on + strand, within BT0733 at 907.689 kb on + strand, within BT0733 at 907.776 kb on - strand, within BT0733 at 907.944 kb on - strand, within BT0733 at 908.105 kb on + strand at 908.240 kb on + strand at 908.240 kb on + strand at 908.282 kb on + strand at 908.293 kb on - strand at 908.390 kb on + strand at 908.410 kb on + strand at 908.468 kb on + strand at 908.473 kb on + strand at 908.473 kb on + strand at 908.473 kb on + strand at 908.475 kb on + strand at 908.559 kb on - strand at 908.560 kb on + strand at 908.605 kb on + strand, within BT0734 at 908.605 kb on + strand, within BT0734 at 908.829 kb on - strand, within BT0734 at 908.873 kb on + strand, within BT0734 at 908.874 kb on - strand, within BT0734 at 908.977 kb on + strand, within BT0734 at 909.052 kb on - strand, within BT0734 at 909.056 kb on - strand, within BT0734
Per-strain Table
Position Strand Gene LocusTag Fraction BHIS with Doxycycline hyclate 0.0001953125 mM remove 905,722 + BT0731 0.85 +0.5 905,786 + -3.4 905,787 - -1.0 905,943 - -1.5 905,973 + +0.5 906,007 + -0.5 906,055 - -1.8 906,055 - +0.5 906,280 + BT0732 0.39 +0.5 906,358 - BT0732 0.51 +0.5 906,499 - BT0732 0.71 -1.8 906,633 - +0.2 906,720 - -0.4 906,728 + +0.6 906,873 + BT0733 0.12 -4.7 906,900 - BT0733 0.13 -2.0 907,048 - BT0733 0.24 -1.0 907,086 + BT0733 0.27 -0.4 907,105 - BT0733 0.28 -0.4 907,233 + BT0733 0.38 +0.6 907,590 - BT0733 0.63 -2.0 907,619 + BT0733 0.66 -2.2 907,619 + BT0733 0.66 -1.8 907,624 - BT0733 0.66 -1.8 907,624 - BT0733 0.66 -1.4 907,665 - BT0733 0.69 -1.4 907,665 - BT0733 0.69 +0.6 907,665 - BT0733 0.69 -0.4 907,666 + BT0733 0.69 -0.4 907,668 + BT0733 0.69 +0.3 907,689 + BT0733 0.71 -3.3 907,776 - BT0733 0.77 +0.9 907,944 - BT0733 0.89 -2.0 908,105 + -0.4 908,240 + -1.0 908,240 + -0.4 908,282 + +0.6 908,293 - -2.2 908,390 + -0.4 908,410 + +0.6 908,468 + -2.6 908,473 + -2.0 908,473 + +0.6 908,473 + -1.0 908,475 + +1.1 908,559 - -1.8 908,560 + +0.6 908,605 + BT0734 0.12 -0.4 908,605 + BT0734 0.12 +0.6 908,829 - BT0734 0.22 +0.6 908,873 + BT0734 0.24 -0.4 908,874 - BT0734 0.24 -2.2 908,977 + BT0734 0.29 -0.4 909,052 - BT0734 0.33 +0.6 909,056 - BT0734 0.33 -1.8
Or see this region's nucleotide sequence