Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0005 and mgtE are separated by 22 nucleotides mgtE and nifB are separated by 449 nucleotides
DVUA0005: DVUA0005 - universal stress protein family (TIGR), at 6,498 to 7,433
DVUA0005
DVUA0006: mgtE - magnesium transporter MgtE, putative (TIGR), at 7,456 to 8,451
mgtE
DVUA0007: nifB - nitrogenase cofactor biosynthesis protein NifB (TIGR), at 8,901 to 10,445
nifB
Position (kb) 7
8
9 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 6.496 kb on + strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.504 kb on - strand at 6.639 kb on + strand, within DVUA0005 at 6.639 kb on - strand, within DVUA0005 at 6.647 kb on - strand, within DVUA0005 at 6.663 kb on + strand, within DVUA0005 at 6.686 kb on + strand, within DVUA0005 at 6.716 kb on - strand, within DVUA0005 at 6.740 kb on + strand, within DVUA0005 at 6.832 kb on + strand, within DVUA0005 at 6.865 kb on - strand, within DVUA0005 at 6.995 kb on + strand, within DVUA0005 at 7.016 kb on + strand, within DVUA0005 at 7.016 kb on + strand, within DVUA0005 at 7.125 kb on + strand, within DVUA0005 at 7.140 kb on - strand, within DVUA0005 at 7.171 kb on + strand, within DVUA0005 at 7.314 kb on - strand, within DVUA0005 at 7.358 kb on + strand at 7.362 kb on + strand at 7.365 kb on - strand at 7.518 kb on + strand at 7.526 kb on - strand at 7.729 kb on - strand, within mgtE at 7.736 kb on + strand, within mgtE at 7.855 kb on - strand, within mgtE at 8.000 kb on - strand, within mgtE at 8.071 kb on + strand, within mgtE at 8.072 kb on - strand, within mgtE at 8.152 kb on + strand, within mgtE at 8.160 kb on - strand, within mgtE at 8.251 kb on - strand, within mgtE at 8.404 kb on - strand at 8.643 kb on - strand at 8.695 kb on + strand at 8.741 kb on + strand at 8.762 kb on + strand at 8.785 kb on + strand at 8.841 kb on + strand at 8.849 kb on - strand at 8.931 kb on - strand at 8.931 kb on - strand at 8.933 kb on - strand at 9.042 kb on - strand at 9.042 kb on - strand at 9.104 kb on + strand, within nifB at 9.124 kb on - strand, within nifB at 9.142 kb on - strand, within nifB at 9.178 kb on - strand, within nifB at 9.261 kb on - strand, within nifB at 9.313 kb on + strand, within nifB at 9.330 kb on + strand, within nifB at 9.338 kb on - strand, within nifB at 9.340 kb on - strand, within nifB at 9.340 kb on - strand, within nifB at 9.363 kb on - strand, within nifB at 9.448 kb on + strand, within nifB
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 6,496 + -2.0 6,504 - -1.6 6,504 - -0.9 6,504 - -1.4 6,504 - -1.6 6,504 - -1.1 6,504 - +0.3 6,639 + DVUA0005 0.15 +0.3 6,639 - DVUA0005 0.15 +0.1 6,647 - DVUA0005 0.16 -0.6 6,663 + DVUA0005 0.18 -0.7 6,686 + DVUA0005 0.20 -0.2 6,716 - DVUA0005 0.23 +0.1 6,740 + DVUA0005 0.26 -1.9 6,832 + DVUA0005 0.36 -1.1 6,865 - DVUA0005 0.39 +0.2 6,995 + DVUA0005 0.53 +0.3 7,016 + DVUA0005 0.55 -1.1 7,016 + DVUA0005 0.55 -0.1 7,125 + DVUA0005 0.67 -1.8 7,140 - DVUA0005 0.69 -0.8 7,171 + DVUA0005 0.72 +0.1 7,314 - DVUA0005 0.87 -0.1 7,358 + -2.4 7,362 + -3.2 7,365 - +0.3 7,518 + +0.3 7,526 - -0.7 7,729 - mgtE DVUA0006 0.27 -1.2 7,736 + mgtE DVUA0006 0.28 +0.7 7,855 - mgtE DVUA0006 0.40 +0.1 8,000 - mgtE DVUA0006 0.55 -0.1 8,071 + mgtE DVUA0006 0.62 +0.9 8,072 - mgtE DVUA0006 0.62 +0.3 8,152 + mgtE DVUA0006 0.70 +0.7 8,160 - mgtE DVUA0006 0.71 -1.3 8,251 - mgtE DVUA0006 0.80 -1.4 8,404 - +0.3 8,643 - -2.6 8,695 + -0.7 8,741 + -2.1 8,762 + +0.9 8,785 + -0.1 8,841 + +0.3 8,849 - -2.3 8,931 - -2.1 8,931 - -1.9 8,933 - -4.8 9,042 - -2.8 9,042 - -2.1 9,104 + nifB DVUA0007 0.13 +0.0 9,124 - nifB DVUA0007 0.14 -2.4 9,142 - nifB DVUA0007 0.16 -3.4 9,178 - nifB DVUA0007 0.18 -3.6 9,261 - nifB DVUA0007 0.23 -1.5 9,313 + nifB DVUA0007 0.27 -3.9 9,330 + nifB DVUA0007 0.28 -3.0 9,338 - nifB DVUA0007 0.28 -3.5 9,340 - nifB DVUA0007 0.28 -3.1 9,340 - nifB DVUA0007 0.28 -3.0 9,363 - nifB DVUA0007 0.30 -5.1 9,448 + nifB DVUA0007 0.35 -3.8
Or see this region's nucleotide sequence