Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1251

Experiment: BG11 with Chlorate 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Chlorate 5 mM
1,273,469	+				-2.1
1,273,587	-				-0.6
1,273,962	-	psaF	Synpcc7942_1250	0.38	-1.4
1,274,169	-	psaF	Synpcc7942_1250	0.81	-0.8
1,274,193	+	psaF	Synpcc7942_1250	0.86	-1.6
1,274,218	+				-0.8
1,274,271	+				-1.2
1,274,285	+				-0.6
1,274,285	+				+1.8
1,274,293	-				-1.1
1,275,466	+				+1.8
1,275,482	+				-0.4
1,275,488	-				-1.5
1,275,490	+				-0.9
1,275,492	+				+0.9
1,275,499	-				-0.6
1,275,500	-				-0.6
1,275,500	-				-0.8
1,275,500	-				+1.2
1,275,505	-				-0.0
1,275,507	+				-0.5
1,275,524	+				+0.4
1,275,530	-				+1.0
1,275,643	+				-0.8
1,275,683	-				-1.3
1,275,760	+		Synpcc7942_1252	0.16	-1.1
1,275,761	+		Synpcc7942_1252	0.16	-1.2
1,275,762	+		Synpcc7942_1252	0.16	-0.6
1,275,768	-		Synpcc7942_1252	0.17	-1.8
1,275,781	+		Synpcc7942_1252	0.18	-1.4
1,275,789	-		Synpcc7942_1252	0.18	-0.1
1,275,833	-		Synpcc7942_1252	0.22	-1.8
1,275,833	-		Synpcc7942_1252	0.22	-1.9
1,275,833	-		Synpcc7942_1252	0.22	-0.8
1,275,852	+		Synpcc7942_1252	0.23	-2.3
1,275,929	-		Synpcc7942_1252	0.29	-2.2
1,275,970	-		Synpcc7942_1252	0.32	-1.4
1,275,980	-		Synpcc7942_1252	0.33	-0.6
1,276,070	+		Synpcc7942_1252	0.40	-1.9
1,276,070	+		Synpcc7942_1252	0.40	-1.1
1,276,070	+		Synpcc7942_1252	0.40	-0.6
1,276,070	+		Synpcc7942_1252	0.40	-1.5
1,276,070	+		Synpcc7942_1252	0.40	-0.6
1,276,070	+		Synpcc7942_1252	0.40	-0.8
1,276,078	-		Synpcc7942_1252	0.41	-2.5
1,276,078	-		Synpcc7942_1252	0.41	-3.2
1,276,078	-		Synpcc7942_1252	0.41	-2.1
1,276,078	-		Synpcc7942_1252	0.41	-1.1
1,276,078	-		Synpcc7942_1252	0.41	-0.5
1,276,078	-		Synpcc7942_1252	0.41	-1.2
1,276,124	+		Synpcc7942_1252	0.44	-1.6
1,276,135	+		Synpcc7942_1252	0.45	-1.0
1,276,158	-		Synpcc7942_1252	0.47	-1.7
1,276,169	+		Synpcc7942_1252	0.48	+1.2
1,276,179	+		Synpcc7942_1252	0.49	-3.5
1,276,204	-		Synpcc7942_1252	0.51	-0.6
1,276,273	+		Synpcc7942_1252	0.56	-1.9
1,276,281	-		Synpcc7942_1252	0.57	-4.2
1,276,295	-		Synpcc7942_1252	0.58	-1.5
1,276,299	+		Synpcc7942_1252	0.58	-1.2
1,276,311	+		Synpcc7942_1252	0.59	-2.1
1,276,321	+		Synpcc7942_1252	0.60	-2.0
1,276,321	+		Synpcc7942_1252	0.60	-0.1
1,276,321	+		Synpcc7942_1252	0.60	-1.4
1,276,329	-		Synpcc7942_1252	0.60	-1.5
1,276,367	+		Synpcc7942_1252	0.63	-3.6
1,276,484	+		Synpcc7942_1252	0.73	-0.6