Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4528

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
4,990,963	+				-3.6
4,990,964	-				+0.1
4,990,978	-				-2.3
4,990,978	-				+0.1
4,991,105	-				+0.1
4,991,105	-				+0.1
4,991,204	+				+0.1
4,991,205	-				+0.1
4,991,228	+				-3.5
4,991,228	+				+0.1
4,991,228	+				-2.4
4,991,228	+				-1.4
4,991,229	-				-2.1
4,991,318	-		Pf1N1B4_4527	0.21	+0.1
4,991,444	+		Pf1N1B4_4527	0.37	-3.4
4,991,444	+		Pf1N1B4_4527	0.37	-2.2
4,991,444	+		Pf1N1B4_4527	0.37	+0.1
4,991,445	-				+0.1
4,991,445	-				+0.1
4,991,445	-				-1.9
4,991,445	-		Pf1N1B4_4527	0.37	+0.1
4,991,472	+		Pf1N1B4_4527	0.41	-2.9
4,991,472	+				+0.1
4,991,473	-		Pf1N1B4_4527	0.41	+0.1
4,992,062	+		Pf1N1B4_4528	0.10	+0.1
4,992,062	+		Pf1N1B4_4528	0.10	-0.7
4,992,063	-		Pf1N1B4_4528	0.11	-1.3
4,992,063	-		Pf1N1B4_4528	0.11	+0.1
4,992,101	+				+0.1
4,992,107	+		Pf1N1B4_4528	0.15	+0.1
4,992,108	-		Pf1N1B4_4528	0.15	-1.4
4,992,110	+		Pf1N1B4_4528	0.15	-1.6
4,992,111	-				-1.4
4,992,152	+		Pf1N1B4_4528	0.19	-2.3
4,992,447	+				-2.1
4,992,512	+		Pf1N1B4_4528	0.53	-1.1
4,992,555	-		Pf1N1B4_4528	0.57	+0.1
4,992,686	+		Pf1N1B4_4528	0.69	+0.1
4,992,728	+		Pf1N1B4_4528	0.73	+0.1
4,992,728	+		Pf1N1B4_4528	0.73	+0.1
4,992,729	-		Pf1N1B4_4528	0.73	+0.1
4,992,729	-		Pf1N1B4_4528	0.73	+0.1
4,993,008	+				-0.7
4,993,030	+				-1.8
4,993,065	+				+0.1
4,993,106	+				+0.1
4,993,106	+				+0.1
4,993,106	+				-2.8
4,993,106	+				-0.9
4,993,106	+				+0.1
4,993,107	-				+0.1
4,993,107	-				-2.1
4,993,107	-				-3.0
4,993,167	-				-1.5
4,993,273	-		Pf1N1B4_4529	0.16	+0.1
4,993,739	+				+0.1
4,993,868	-				-2.4
4,993,868	-				-1.9