Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4093

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,423	-		Pf1N1B4_4092	0.47	-2.3
4,541,423	-				-3.1
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,444	-		Pf1N1B4_4092	0.48	-2.3
4,541,630	-		Pf1N1B4_4092	0.61	-2.3
4,541,630	-				-4.3
4,541,833	+				+0.1
4,541,834	-		Pf1N1B4_4092	0.76	+0.1
4,541,894	-		Pf1N1B4_4092	0.80	-1.8
4,541,896	+		Pf1N1B4_4092	0.80	-0.5
4,541,896	+		Pf1N1B4_4092	0.80	+0.1
4,541,896	+		Pf1N1B4_4092	0.80	+0.1
4,541,897	-		Pf1N1B4_4092	0.80	-0.7
4,541,897	-		Pf1N1B4_4092	0.80	-1.8
4,541,969	+		Pf1N1B4_4092	0.85	-3.8
4,541,969	+		Pf1N1B4_4092	0.85	-1.8
4,541,986	+		Pf1N1B4_4092	0.87	+0.1
4,541,986	+		Pf1N1B4_4092	0.87	+0.1
4,542,072	+				+0.1
4,542,112	+				+0.1
4,542,115	+				+0.1
4,542,240	+				+0.1
4,542,240	+				-1.1
4,542,243	-				+0.1
4,542,307	+				-2.0
4,542,320	+				+0.1
4,542,320	+				-3.6
4,542,484	+		Pf1N1B4_4093	0.23	+0.1
4,542,656	-		Pf1N1B4_4093	0.49	-3.2
4,542,712	-		Pf1N1B4_4093	0.58	+0.1
4,542,770	-		Pf1N1B4_4093	0.67	+0.1
4,542,770	-		Pf1N1B4_4093	0.67	+0.1
4,542,929	-				+0.1
4,542,958	+				+0.1
4,542,959	-				+0.1
4,543,021	+				+0.1
4,543,167	+				+0.1
4,543,167	+				+0.1
4,543,176	-				-3.3
4,543,176	-				-2.6
4,543,380	-		Pf1N1B4_4094	0.34	-1.4
4,543,445	-		Pf1N1B4_4094	0.47	+0.1
4,543,536	-		Pf1N1B4_4094	0.65	-2.4
4,543,928	-		Pf1N1B4_4095	0.21	+0.1