Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4091

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
4,539,303	+		Pf1N1B4_4090	0.76	+0.1
4,539,303	+		Pf1N1B4_4090	0.76	-2.8
4,539,304	-		Pf1N1B4_4090	0.76	-2.3
4,539,304	-		Pf1N1B4_4090	0.76	+0.1
4,539,327	+		Pf1N1B4_4090	0.78	-1.7
4,539,327	+		Pf1N1B4_4090	0.78	+0.1
4,539,329	+		Pf1N1B4_4090	0.78	-1.8
4,539,329	+		Pf1N1B4_4090	0.78	-1.3
4,539,482	-		Pf1N1B4_4090	0.87	+0.1
4,539,523	-		Pf1N1B4_4090	0.89	+0.1
4,539,528	+		Pf1N1B4_4090	0.89	+0.1
4,539,528	+		Pf1N1B4_4090	0.89	+0.1
4,539,529	-		Pf1N1B4_4090	0.89	-3.3
4,539,696	+				+0.1
4,539,697	-				+0.1
4,539,808	-				-2.2
4,539,808	-				-2.3
4,539,824	+				+0.1
4,539,825	-				-2.2
4,539,825	-				+0.1
4,539,825	-				-1.7
4,539,832	+				+0.1
4,539,832	+				+0.1
4,539,862	+				-1.0
4,539,862	+				-3.5
4,539,862	+				-1.7
4,539,863	-				+0.1
4,539,863	-				+0.1
4,540,024	-		Pf1N1B4_4091	0.27	+0.1
4,540,024	-		Pf1N1B4_4091	0.27	+0.1
4,540,024	-		Pf1N1B4_4091	0.27	+0.1
4,540,024	-		Pf1N1B4_4091	0.27	+0.3
4,540,102	-		Pf1N1B4_4091	0.37	+0.1
4,540,102	-		Pf1N1B4_4091	0.37	-2.0
4,540,144	-		Pf1N1B4_4091	0.43	-3.3
4,540,152	+		Pf1N1B4_4091	0.44	-2.1
4,540,153	-		Pf1N1B4_4091	0.44	+0.1
4,540,285	-		Pf1N1B4_4091	0.62	+0.1
4,540,291	-				+0.1
4,540,291	-		Pf1N1B4_4091	0.63	+0.1
4,540,291	-		Pf1N1B4_4091	0.63	+0.1
4,540,291	-		Pf1N1B4_4091	0.63	+0.1
4,540,299	+		Pf1N1B4_4091	0.64	-2.1
4,540,404	+				-2.5
4,540,405	-		Pf1N1B4_4091	0.78	-1.7
4,540,405	-		Pf1N1B4_4091	0.78	+0.1
4,540,405	-		Pf1N1B4_4091	0.78	+0.1
4,540,464	+		Pf1N1B4_4091	0.86	+0.1
4,540,464	+		Pf1N1B4_4091	0.86	+0.1
4,540,563	+				+0.1
4,540,563	+				+0.1
4,540,563	+				+0.1
4,540,564	-				+0.1
4,540,590	+				-1.7
4,540,591	-				+0.1
4,540,760	+				+0.1
4,540,822	+				-2.7
4,540,822	+				+0.1
4,540,823	-				+0.1
4,541,071	+				-2.1
4,541,297	-		Pf1N1B4_4092	0.38	+0.1
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,423	-		Pf1N1B4_4092	0.47	-2.3
4,541,423	-				-3.1
4,541,423	-		Pf1N1B4_4092	0.47	+0.1
4,541,444	-		Pf1N1B4_4092	0.48	-2.3