Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3982

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
4,422,740	+		Pf1N1B4_3981	0.59	+0.0
4,422,868	+		Pf1N1B4_3981	0.70	+0.0
4,422,964	+		Pf1N1B4_3981	0.78	+0.0
4,422,983	-		Pf1N1B4_3981	0.80	+0.0
4,423,003	+		Pf1N1B4_3981	0.82	-1.0
4,423,202	+				-1.5
4,423,203	-				-3.1
4,423,332	-				+0.0
4,423,371	-				+0.0
4,423,411	-				+0.0
4,423,466	-				-2.6
4,423,466	-				+0.0
4,423,488	-				+0.0
4,423,488	-				+0.0
4,423,488	-				+0.0
4,423,488	-				+0.0
4,423,552	-				+0.0
4,423,552	-				+0.0
4,423,570	-				-2.4
4,423,570	-				-2.3
4,423,570	-				+0.0
4,423,570	-				+0.0
4,423,570	-				-3.8
4,423,570	-				-2.9
4,423,681	-				+0.0
4,423,681	-				-2.7
4,423,681	-				-3.3
4,423,691	-				+0.0
4,423,842	+		Pf1N1B4_3982	0.42	+0.0
4,423,843	-		Pf1N1B4_3982	0.42	-2.9
4,423,843	-		Pf1N1B4_3982	0.42	-4.3
4,423,942	+		Pf1N1B4_3982	0.71	+0.0
4,423,942	+		Pf1N1B4_3982	0.71	-2.9
4,423,943	-		Pf1N1B4_3982	0.72	+0.0
4,423,943	-				-3.1
4,423,945	+		Pf1N1B4_3982	0.72	+0.0
4,423,945	+		Pf1N1B4_3982	0.72	+0.0
4,423,945	+		Pf1N1B4_3982	0.72	-3.4
4,423,946	-		Pf1N1B4_3982	0.73	+0.0
4,423,946	-		Pf1N1B4_3982	0.73	-2.2
4,424,060	+				+0.0
4,424,060	+				-4.8
4,424,061	-				+0.0
4,424,085	+				+0.0
4,424,085	+				-1.6
4,424,086	-				+0.0
4,424,088	+				-2.4
4,424,088	+				-2.8
4,424,088	+				+0.0
4,424,089	-				+0.0
4,424,089	-				-1.4
4,424,089	-				+0.0
4,424,089	-				+0.0
4,424,092	+				-1.1
4,424,092	+				-3.7
4,424,092	+				-2.9
4,424,092	+				-2.9
4,424,092	+				-3.5
4,424,092	+				+0.0
4,424,092	+				-2.5
4,424,092	+				-2.9
4,424,093	-				+0.0
4,424,093	-				+0.0
4,424,093	-				-3.7
4,424,098	-				-3.9
4,424,121	+				+0.0
4,424,121	+				+0.0
4,424,156	+				-2.5
4,424,231	-				-1.9
4,424,231	-		Pf1N1B4_3983	0.11	+0.0
4,424,282	+		Pf1N1B4_3983	0.18	+0.0
4,424,282	+				-1.0
4,424,344	-		Pf1N1B4_3983	0.27	-2.0
4,424,344	-		Pf1N1B4_3983	0.27	+0.0
4,424,415	+		Pf1N1B4_3983	0.38	+0.0
4,424,415	+		Pf1N1B4_3983	0.38	+0.0
4,424,416	-				-2.0
4,424,482	+		Pf1N1B4_3983	0.48	+0.0
4,424,538	+		Pf1N1B4_3983	0.56	+0.0
4,424,807	-				+0.0
4,424,833	-				-0.7
4,424,935	+				-2.0
4,424,936	-				-2.6
4,424,936	-				-1.6