Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3304

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
3,691,749	+		Pf1N1B4_3302	0.61	-1.5
3,691,750	-		Pf1N1B4_3302	0.62	-0.0
3,691,773	+		Pf1N1B4_3302	0.65	-4.7
3,691,805	+		Pf1N1B4_3302	0.70	-2.5
3,691,805	+		Pf1N1B4_3302	0.70	-1.7
3,691,805	+				-0.0
3,691,805	+		Pf1N1B4_3302	0.70	-0.0
3,691,805	+		Pf1N1B4_3302	0.70	-2.4
3,691,806	-		Pf1N1B4_3302	0.70	-0.0
3,691,806	-		Pf1N1B4_3302	0.70	-0.0
3,691,806	-		Pf1N1B4_3302	0.70	-0.0
3,691,806	-		Pf1N1B4_3302	0.70	-1.7
3,691,813	-		Pf1N1B4_3302	0.71	-0.0
3,691,840	-		Pf1N1B4_3302	0.76	-1.0
3,692,195	+		Pf1N1B4_3303	0.26	-0.0
3,692,207	+		Pf1N1B4_3303	0.27	-0.0
3,692,208	-		Pf1N1B4_3303	0.28	-0.8
3,692,208	-		Pf1N1B4_3303	0.28	-2.1
3,692,208	-				-0.0
3,692,322	+		Pf1N1B4_3303	0.43	-3.5
3,692,747	+				-0.0
3,692,837	+		Pf1N1B4_3304	0.12	-0.0
3,692,837	+		Pf1N1B4_3304	0.12	-2.9
3,692,838	-				-4.0
3,692,838	-		Pf1N1B4_3304	0.12	-0.0
3,692,838	-		Pf1N1B4_3304	0.12	-2.6
3,692,855	+				-4.1
3,692,856	-		Pf1N1B4_3304	0.14	-2.7
3,692,856	-		Pf1N1B4_3304	0.14	-2.9
3,693,370	-		Pf1N1B4_3304	0.79	-2.1
3,693,388	+		Pf1N1B4_3304	0.81	-0.0
3,693,389	-		Pf1N1B4_3304	0.81	-0.0
3,693,391	+		Pf1N1B4_3304	0.82	-2.7
3,693,392	-				-3.5
3,693,485	-				-0.0
3,693,497	+				-0.0
3,693,498	-				-0.0
3,693,498	-				-0.0
3,693,498	-				-0.0
3,693,550	+				-0.0
3,693,550	+				-0.0
3,693,550	+				-0.0
3,693,551	-				-1.0
3,693,704	+		Pf1N1B4_3305	0.21	-0.0
3,693,704	+		Pf1N1B4_3305	0.21	-0.0
3,694,141	+		Pf1N1B4_3305	0.75	-5.4
3,694,141	+		Pf1N1B4_3305	0.75	-0.0
3,694,142	-		Pf1N1B4_3305	0.75	-0.0
3,694,142	-		Pf1N1B4_3305	0.75	-0.0
3,694,142	-				-1.5
3,694,142	-		Pf1N1B4_3305	0.75	-0.0
3,694,173	+		Pf1N1B4_3305	0.79	-2.4
3,694,264	+		Pf1N1B4_3305	0.90	-0.0
3,694,351	+				-2.5
3,694,365	+				-2.5
3,694,365	+				-1.6
3,694,365	+				-2.8
3,694,365	+				-0.0
3,694,365	+				-0.0
3,694,365	+				-0.0
3,694,365	+				-2.0
3,694,366	-				-3.3
3,694,366	-				-4.3
3,694,395	+				-0.0
3,694,395	+				-0.0
3,694,395	+				-3.6
3,694,395	+				-0.0
3,694,395	+				-2.3
3,694,395	+				-0.0
3,694,395	+				-0.0
3,694,396	-				-3.0
3,694,396	-				-0.0
3,694,396	-				-4.1
3,694,396	-				-3.8
3,694,396	-				-2.8