Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2496

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
2,829,763	+		Pf1N1B4_2495	0.61	-4.6
2,829,763	+		Pf1N1B4_2495	0.61	-2.4
2,829,763	+		Pf1N1B4_2495	0.61	-0.0
2,829,764	-		Pf1N1B4_2495	0.61	-0.0
2,829,764	-		Pf1N1B4_2495	0.61	-0.0
2,829,764	-		Pf1N1B4_2495	0.61	-0.0
2,829,988	+		Pf1N1B4_2495	0.73	-2.6
2,829,988	+		Pf1N1B4_2495	0.73	-2.3
2,829,988	+		Pf1N1B4_2495	0.73	-2.1
2,829,988	+		Pf1N1B4_2495	0.73	-1.6
2,829,988	+		Pf1N1B4_2495	0.73	-0.0
2,829,989	-		Pf1N1B4_2495	0.73	-0.0
2,829,989	-		Pf1N1B4_2495	0.73	-2.3
2,829,989	-		Pf1N1B4_2495	0.73	-0.0
2,829,989	-		Pf1N1B4_2495	0.73	-1.2
2,830,017	-		Pf1N1B4_2495	0.75	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-2.0
2,830,129	+		Pf1N1B4_2495	0.81	-2.1
2,830,129	+		Pf1N1B4_2495	0.81	-2.3
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	+1.6
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-0.0
2,830,129	+		Pf1N1B4_2495	0.81	-2.0
2,830,130	-		Pf1N1B4_2495	0.81	-3.2
2,830,130	-		Pf1N1B4_2495	0.81	-3.0
2,830,130	-		Pf1N1B4_2495	0.81	-0.0
2,830,130	-		Pf1N1B4_2495	0.81	-0.0
2,830,130	-		Pf1N1B4_2495	0.81	-0.0
2,830,130	-		Pf1N1B4_2495	0.81	-1.6
2,830,130	-		Pf1N1B4_2495	0.81	-1.9
2,830,130	-		Pf1N1B4_2495	0.81	-0.0
2,830,237	+		Pf1N1B4_2495	0.87	-0.0
2,830,237	+		Pf1N1B4_2495	0.87	-0.0
2,830,237	+		Pf1N1B4_2495	0.87	-0.0
2,830,246	+		Pf1N1B4_2495	0.88	-0.0
2,830,246	+		Pf1N1B4_2495	0.88	-0.0
2,830,246	+		Pf1N1B4_2495	0.88	-0.0
2,830,246	+		Pf1N1B4_2495	0.88	-2.5
2,830,246	+				-2.8
2,830,246	+		Pf1N1B4_2495	0.88	-0.0
2,830,246	+		Pf1N1B4_2495	0.88	-3.0
2,830,246	+		Pf1N1B4_2495	0.88	-0.0
2,830,247	-		Pf1N1B4_2495	0.88	-4.1
2,830,247	-		Pf1N1B4_2495	0.88	-0.0
2,830,247	-		Pf1N1B4_2495	0.88	-0.0
2,830,247	-		Pf1N1B4_2495	0.88	-0.0
2,830,247	-		Pf1N1B4_2495	0.88	-0.0
2,830,255	+		Pf1N1B4_2495	0.88	-0.0
2,830,256	-		Pf1N1B4_2495	0.88	-0.0
2,830,280	+		Pf1N1B4_2495	0.89	-0.0
2,830,336	+				-2.1
2,830,369	+				-0.0
2,830,369	+				-3.4
2,830,392	+				-1.5
2,830,392	+				-0.0
2,830,392	+				-0.0
2,830,392	+				-0.0
2,830,393	-				-0.0
2,830,510	+				-0.0
2,830,518	+				-0.0
2,830,518	+				-0.0
2,830,518	+				-0.0
2,830,518	+				-3.0
2,830,519	-				-0.0
2,830,519	-				-1.7
2,830,554	+				-3.8
2,830,554	+				-0.0
2,830,628	+				-0.0
2,830,653	+				-0.0
2,830,654	-				-2.8
2,830,678	-				-0.0
2,830,701	+				-0.0
2,830,702	-				-1.9
2,830,706	+				-0.0
2,830,706	+				-0.0
2,830,706	+				-1.6
2,830,706	+				-4.8
2,830,706	+				-0.0
2,830,707	-				-1.8
2,830,707	-				-1.7
2,830,707	-				-0.0
2,830,707	-				-3.6
2,830,707	-				-0.0
2,830,707	-				-0.0
2,830,721	+				-0.0
2,830,722	-				-0.0
2,830,722	-				-2.4
2,830,750	+				-0.0
2,830,750	+				-2.2
2,830,750	+				-0.0
2,830,750	+				-0.0
2,830,750	+				-1.3
2,830,751	-				-0.0
2,830,991	-		Pf1N1B4_2496	0.14	-0.0
2,830,999	+		Pf1N1B4_2496	0.15	-0.0
2,830,999	+		Pf1N1B4_2496	0.15	-0.0
2,830,999	+		Pf1N1B4_2496	0.15	-0.0
2,830,999	+		Pf1N1B4_2496	0.15	-0.0
2,830,999	+				-2.7
2,830,999	+		Pf1N1B4_2496	0.15	-0.0
2,831,000	-		Pf1N1B4_2496	0.15	-0.0
2,831,000	-		Pf1N1B4_2496	0.15	-2.1
2,831,000	-		Pf1N1B4_2496	0.15	-1.9
2,831,000	-		Pf1N1B4_2496	0.15	-1.2
2,831,000	-		Pf1N1B4_2496	0.15	-0.0
2,831,041	+		Pf1N1B4_2496	0.17	-0.0
2,831,120	+		Pf1N1B4_2496	0.21	-0.0
2,831,120	+		Pf1N1B4_2496	0.21	-0.0
2,831,120	+		Pf1N1B4_2496	0.21	-0.0
2,831,120	+		Pf1N1B4_2496	0.21	-3.2
2,831,120	+		Pf1N1B4_2496	0.21	-0.0
2,831,120	+		Pf1N1B4_2496	0.21	-0.0
2,831,206	+		Pf1N1B4_2496	0.26	-1.8
2,831,206	+		Pf1N1B4_2496	0.26	-0.0
2,831,206	+		Pf1N1B4_2496	0.26	-2.8
2,831,206	+		Pf1N1B4_2496	0.26	-0.0
2,831,206	+				-0.0
2,831,206	+		Pf1N1B4_2496	0.26	-0.0
2,831,207	-		Pf1N1B4_2496	0.26	-0.6
2,831,207	-		Pf1N1B4_2496	0.26	-0.7
2,831,207	-		Pf1N1B4_2496	0.26	-0.0
2,831,207	-		Pf1N1B4_2496	0.26	-0.0
2,831,207	-		Pf1N1B4_2496	0.26	-1.1
2,831,207	-		Pf1N1B4_2496	0.26	-0.0
2,831,207	-		Pf1N1B4_2496	0.26	-0.0
2,831,207	-		Pf1N1B4_2496	0.26	-1.0
2,831,216	+				-0.0
2,831,216	+		Pf1N1B4_2496	0.27	-0.0
2,831,217	-		Pf1N1B4_2496	0.27	-2.5
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,308	+		Pf1N1B4_2496	0.32	-0.0
2,831,309	-		Pf1N1B4_2496	0.32	-0.0
2,831,309	-		Pf1N1B4_2496	0.32	-0.0
2,831,309	-		Pf1N1B4_2496	0.32	-0.0
2,831,382	-		Pf1N1B4_2496	0.36	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-2.2
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,623	+		Pf1N1B4_2496	0.50	-3.4
2,831,623	+		Pf1N1B4_2496	0.50	-0.0
2,831,624	-		Pf1N1B4_2496	0.50	-0.0
2,831,624	-		Pf1N1B4_2496	0.50	-2.5
2,831,624	-		Pf1N1B4_2496	0.50	-0.0
2,831,692	+		Pf1N1B4_2496	0.53	-2.0
2,831,839	+		Pf1N1B4_2496	0.62	-0.0
2,831,839	+		Pf1N1B4_2496	0.62	-0.0
2,831,839	+		Pf1N1B4_2496	0.62	-0.0
2,831,839	+		Pf1N1B4_2496	0.62	-0.9
2,831,840	-		Pf1N1B4_2496	0.62	-2.1
2,831,840	-		Pf1N1B4_2496	0.62	-0.0
2,831,840	-		Pf1N1B4_2496	0.62	-0.0
2,832,044	+		Pf1N1B4_2496	0.73	-2.6
2,832,044	+		Pf1N1B4_2496	0.73	-0.0
2,832,044	+		Pf1N1B4_2496	0.73	-1.6
2,832,044	+		Pf1N1B4_2496	0.73	-3.3
2,832,044	+		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-1.9
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-0.0
2,832,045	-		Pf1N1B4_2496	0.73	-1.6
2,832,051	+		Pf1N1B4_2496	0.74	-0.0
2,832,061	+		Pf1N1B4_2496	0.74	-0.0
2,832,061	+		Pf1N1B4_2496	0.74	-0.0
2,832,061	+		Pf1N1B4_2496	0.74	-1.9
2,832,061	+		Pf1N1B4_2496	0.74	-0.0
2,832,061	+		Pf1N1B4_2496	0.74	-1.6
2,832,061	+		Pf1N1B4_2496	0.74	-0.0
2,832,098	+		Pf1N1B4_2496	0.76	-3.0
2,832,098	+		Pf1N1B4_2496	0.76	-0.0
2,832,098	+		Pf1N1B4_2496	0.76	-3.7
2,832,099	-		Pf1N1B4_2496	0.76	-0.0
2,832,099	-		Pf1N1B4_2496	0.76	-0.0
2,832,099	-		Pf1N1B4_2496	0.76	-0.8
2,832,099	-		Pf1N1B4_2496	0.76	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-1.8
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-1.6
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-0.0
2,832,133	+		Pf1N1B4_2496	0.78	-1.8
2,832,134	-		Pf1N1B4_2496	0.78	-0.0
2,832,134	-		Pf1N1B4_2496	0.78	-2.0
2,832,134	-		Pf1N1B4_2496	0.78	-0.0
2,832,134	-		Pf1N1B4_2496	0.78	-0.8
2,832,304	+		Pf1N1B4_2496	0.88	-2.3
2,832,305	-		Pf1N1B4_2496	0.88	-1.4
2,832,322	+		Pf1N1B4_2496	0.89	-0.0
2,832,322	+		Pf1N1B4_2496	0.89	-1.1
2,832,323	-		Pf1N1B4_2496	0.89	-0.0
2,832,331	+		Pf1N1B4_2496	0.89	-0.0
2,832,331	+		Pf1N1B4_2496	0.89	-2.2
2,832,332	-		Pf1N1B4_2496	0.89	-0.0
2,832,332	-		Pf1N1B4_2496	0.89	-0.0
2,832,332	-				-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-0.0
2,832,337	+		Pf1N1B4_2496	0.90	-1.2
2,832,337	+		Pf1N1B4_2496	0.90	-2.4
2,832,337	+		Pf1N1B4_2496	0.90	-1.5
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-1.6
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-0.9
2,832,338	-		Pf1N1B4_2496	0.90	-2.1
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-2.0
2,832,338	-		Pf1N1B4_2496	0.90	-1.4
2,832,338	-		Pf1N1B4_2496	0.90	-2.3
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-0.0
2,832,338	-		Pf1N1B4_2496	0.90	-1.8
2,832,424	+				-1.8
2,832,424	+				-0.0
2,832,425	-				-0.0
2,832,425	-				-1.9
2,832,531	+				-0.0
2,832,535	+				-2.3
2,832,535	+				-0.0
2,832,536	-				-0.9
2,832,536	-				-0.0
2,832,536	-				-0.0
2,832,536	-				-0.0
2,832,536	-				-0.0
2,832,536	-				-0.0
2,832,536	-				-0.0
2,832,536	-				-1.9
2,832,536	-				-0.0
2,832,547	+				-0.0
2,832,547	+				-0.0
2,832,547	+				-2.2
2,832,547	+				-1.3
2,832,547	+				-0.0
2,832,547	+				-1.1
2,832,547	+				-2.1
2,832,548	-				-1.5
2,832,548	-				-0.0
2,832,548	-				-0.0
2,832,548	-				-1.2
2,832,548	-				-0.0
2,832,551	+				-1.6
2,832,551	+				-1.4
2,832,551	+				-1.2
2,832,595	+				-0.0
2,832,595	+				-0.0
2,832,595	+				-0.0
2,832,596	-				-0.0
2,832,596	-				-0.0
2,832,600	+				-0.0
2,832,600	+				-0.0
2,832,600	+				-0.0
2,832,600	+				-0.0
2,832,600	+				-3.8
2,832,600	+				-1.4
2,832,600	+				-2.7
2,832,601	-				-0.0
2,832,601	-				-1.9
2,832,650	+				-1.8
2,832,650	+				-2.1
2,832,650	+				-1.8
2,832,651	-				-1.7
2,832,785	-				-1.6
2,832,785	-				-1.9
2,832,800	+				-2.4
2,832,801	-				-0.0
2,832,801	-				-1.8
2,832,801	-				-0.0
2,832,834	+				-0.0
2,832,878	+				-5.3
2,832,885	+				-0.0
2,832,885	+				-3.5
2,832,885	+				-1.9
2,832,886	-				-2.5
2,832,895	-				-0.0
2,832,895	-				-0.0
2,832,932	-				-0.0
2,833,035	-		Pf1N1B4_2497	0.70	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	+1.0
2,833,050	+		Pf1N1B4_2497	0.80	-3.1
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-1.0
2,833,050	+				-4.1
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-1.9
2,833,050	+		Pf1N1B4_2497	0.80	-0.0
2,833,050	+		Pf1N1B4_2497	0.80	-2.5
2,833,051	-		Pf1N1B4_2497	0.81	-2.3
2,833,051	-		Pf1N1B4_2497	0.81	-2.6
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-2.8
2,833,061	+		Pf1N1B4_2497	0.87	-1.9
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-2.6
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-3.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-2.2
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,061	+		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-2.4
2,833,062	-		Pf1N1B4_2497	0.87	-2.4
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-0.0
2,833,062	-		Pf1N1B4_2497	0.87	-1.4
2,833,062	-		Pf1N1B4_2497	0.87	-2.7
2,833,063	+		Pf1N1B4_2497	0.88	-2.9
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,063	+		Pf1N1B4_2497	0.88	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,064	-		Pf1N1B4_2497	0.89	-0.0
2,833,098	+				-5.1
2,833,153	+				-0.0
2,833,153	+				-2.3
2,833,153	+				-2.8
2,833,153	+				-0.0
2,833,153	+				-2.6
2,833,153	+				-0.0
2,833,153	+				-3.7
2,833,153	+				-2.2
2,833,154	-				-0.0
2,833,154	-				-0.0
2,833,154	-				-0.0
2,833,154	-				-2.2
2,833,154	-				-3.5
2,833,154	-				-2.4
2,833,154	-				-0.0
2,833,339	+				-3.2
2,833,339	+				-0.0
2,833,340	-				-0.0
2,833,340	-				-0.0
2,833,340	-				-0.0
2,833,340	-				-0.0