Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1991

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
2,275,485	-		Pf1N1B4_1990	0.31	-0.0
2,275,485	-		Pf1N1B4_1990	0.31	-0.0
2,275,673	+		Pf1N1B4_1990	0.52	-0.0
2,275,674	-		Pf1N1B4_1990	0.52	-2.1
2,275,792	+		Pf1N1B4_1990	0.65	-0.0
2,275,792	+				-2.9
2,275,792	+		Pf1N1B4_1990	0.65	-0.0
2,275,793	-		Pf1N1B4_1990	0.65	-2.7
2,275,793	-		Pf1N1B4_1990	0.65	-2.0
2,275,793	-		Pf1N1B4_1990	0.65	-2.2
2,275,793	-		Pf1N1B4_1990	0.65	-0.0
2,275,793	-		Pf1N1B4_1990	0.65	-2.6
2,275,815	-		Pf1N1B4_1990	0.67	-3.5
2,275,919	+		Pf1N1B4_1990	0.79	-0.0
2,275,919	+		Pf1N1B4_1990	0.79	-1.8
2,275,920	-		Pf1N1B4_1990	0.79	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-2.9
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-1.9
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-1.2
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,932	+		Pf1N1B4_1990	0.80	-0.0
2,275,933	-		Pf1N1B4_1990	0.81	-4.2
2,275,933	-		Pf1N1B4_1990	0.81	-0.0
2,275,933	-		Pf1N1B4_1990	0.81	-0.0
2,275,933	-		Pf1N1B4_1990	0.81	-3.5
2,276,343	+		Pf1N1B4_1991	0.12	-0.0
2,276,343	+		Pf1N1B4_1991	0.12	-0.0
2,276,343	+		Pf1N1B4_1991	0.12	-0.0
2,276,344	-		Pf1N1B4_1991	0.12	-0.0
2,276,344	-		Pf1N1B4_1991	0.12	-0.0
2,276,344	-		Pf1N1B4_1991	0.12	-2.6
2,276,344	-		Pf1N1B4_1991	0.12	-0.0
2,276,344	-		Pf1N1B4_1991	0.12	-2.6
2,276,344	-		Pf1N1B4_1991	0.12	-1.1
2,276,344	-		Pf1N1B4_1991	0.12	-0.0
2,276,426	-		Pf1N1B4_1991	0.19	-0.0
2,276,438	+		Pf1N1B4_1991	0.20	-0.0
2,276,439	-		Pf1N1B4_1991	0.20	-0.0
2,276,941	-		Pf1N1B4_1991	0.62	-0.0
2,277,196	+		Pf1N1B4_1991	0.83	-0.0
2,277,360	+				-2.8
2,277,360	+				-0.0
2,277,360	+				-1.0
2,277,361	-				-1.3
2,277,361	-				-2.0
2,277,493	-		Pf1N1B4_1992	0.25	-0.0
2,277,493	-		Pf1N1B4_1992	0.25	-3.7
2,277,588	-		Pf1N1B4_1992	0.50	-0.0
2,277,606	+		Pf1N1B4_1992	0.55	-2.0
2,277,606	+		Pf1N1B4_1992	0.55	-0.0
2,277,606	+		Pf1N1B4_1992	0.55	-0.0
2,277,606	+		Pf1N1B4_1992	0.55	-0.0
2,277,606	+		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-3.2
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-3.5
2,277,607	-		Pf1N1B4_1992	0.55	-1.8
2,277,607	-		Pf1N1B4_1992	0.55	-0.0
2,277,607	-		Pf1N1B4_1992	0.55	-2.8
2,277,636	+		Pf1N1B4_1992	0.63	-0.0
2,277,636	+		Pf1N1B4_1992	0.63	-0.0
2,277,656	+		Pf1N1B4_1992	0.68	-0.0
2,277,656	+		Pf1N1B4_1992	0.68	-0.0
2,277,656	+		Pf1N1B4_1992	0.68	-0.0
2,277,657	-		Pf1N1B4_1992	0.69	-0.0
2,277,657	-		Pf1N1B4_1992	0.69	-0.0
2,277,657	-		Pf1N1B4_1992	0.69	-0.0
2,277,657	-		Pf1N1B4_1992	0.69	-0.0
2,277,657	-		Pf1N1B4_1992	0.69	-0.0
2,277,802	+				-0.0
2,277,802	+				-0.0
2,277,803	-				-0.0
2,277,803	-				-4.6
2,277,828	+				-2.2
2,277,829	-				-2.2
2,277,942	+				-0.0
2,277,942	+				-0.0
2,277,943	-				-0.0
2,277,943	-				-0.0
2,277,943	-				-0.0
2,277,943	-				-0.0
2,278,253	+		Pf1N1B4_1993	0.86	-0.0
2,278,253	+		Pf1N1B4_1993	0.86	-4.3
2,278,330	+				-0.0
2,278,331	-				-0.0
2,278,331	-				-0.0
2,278,393	-				-0.0
2,278,401	+				-0.0
2,278,401	+				-0.0