Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1559

Experiment: Nitrate reduction, replicate C t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C t2
1,797,687	+				+0.0
1,797,688	-				+0.0
1,797,714	-				-1.3
1,797,717	+				+0.0
1,797,717	+				-2.1
1,797,717	+				+0.0
1,797,717	+				+0.0
1,797,718	-				-0.8
1,797,718	-				+0.0
1,797,718	-				+0.0
1,797,718	-				+0.0
1,797,718	-				-1.1
1,797,718	-				+0.0
1,797,718	-				-1.6
1,797,718	-				-1.9
1,797,740	-				+0.0
1,797,782	+				+0.0
1,797,782	+				-2.7
1,797,782	+				-1.8
1,797,911	+		Pf1N1B4_1558	0.19	-2.2
1,797,912	-		Pf1N1B4_1558	0.19	+0.0
1,797,912	-				+0.0
1,797,915	-		Pf1N1B4_1558	0.19	+0.0
1,798,026	-		Pf1N1B4_1558	0.37	+0.0
1,798,275	-		Pf1N1B4_1558	0.77	+1.1
1,798,319	+		Pf1N1B4_1558	0.85	-5.3
1,798,319	+		Pf1N1B4_1558	0.85	+0.0
1,798,319	+		Pf1N1B4_1558	0.85	+0.0
1,798,319	+		Pf1N1B4_1558	0.85	-2.1
1,798,445	+				-3.1
1,798,445	+				+0.0
1,798,446	-				+0.0
1,798,526	+				+0.0
1,798,526	+				+0.0
1,798,526	+				+0.0
1,798,526	+				+0.0
1,798,782	-		Pf1N1B4_1559	0.12	+0.0
1,798,904	-		Pf1N1B4_1559	0.28	+0.0
1,798,939	+		Pf1N1B4_1559	0.32	-3.4
1,799,339	-		Pf1N1B4_1559	0.83	+0.0
1,799,385	-		Pf1N1B4_1559	0.89	+0.0
1,799,413	-				+0.0
1,799,413	-				+0.0
1,799,493	-				+0.0
1,799,535	-		Pf1N1B4_1560	0.12	+0.0
1,799,804	-		Pf1N1B4_1560	0.76	+0.0
1,799,804	-		Pf1N1B4_1560	0.76	+0.0
1,799,804	-		Pf1N1B4_1560	0.76	-5.0
1,799,894	+				+0.0
1,799,970	+				-4.4
1,799,979	+				+0.0
1,799,979	+				-4.8
1,799,979	+				-2.8
1,799,980	-				-4.0
1,799,984	-				-3.6
1,799,997	+				+0.1
1,800,009	+				+0.0
1,800,009	+				+0.0
1,800,009	+				-1.9
1,800,009	+				-2.0
1,800,009	+				+0.0
1,800,009	+				+0.0
1,800,009	+				+0.0
1,800,009	+				+0.0
1,800,010	-				-4.8
1,800,010	-				+0.0
1,800,010	-				-2.4
1,800,010	-				+0.0
1,800,010	-				+0.0
1,800,010	-				+0.0
1,800,010	-				+0.0
1,800,010	-				+0.0
1,800,010	-				+0.0
1,800,017	+				-2.7
1,800,017	+				+0.0
1,800,017	+				-2.0
1,800,017	+				-3.2
1,800,017	+				-3.0
1,800,017	+				-2.9
1,800,017	+				+0.0
1,800,018	-				+1.0
1,800,018	-				-1.5
1,800,018	-				+0.0
1,800,018	-				-1.9
1,800,021	+				-3.7
1,800,022	-				-1.2
1,800,022	-				-1.3
1,800,022	-				-3.1
1,800,067	+				-2.6
1,800,067	+				-3.8
1,800,067	+				-2.1
1,800,068	-				-3.6
1,800,078	+				+0.0
1,800,078	+				-1.9
1,800,079	-				+0.0
1,800,079	-				+0.0
1,800,097	-				+0.0
1,800,097	-				+0.0
1,800,268	-				+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,268	-		Pf1N1B4_1561	0.41	+0.0
1,800,281	+		Pf1N1B4_1561	0.46	+0.0
1,800,281	+				-2.6
1,800,282	-		Pf1N1B4_1561	0.46	+0.0
1,800,282	-		Pf1N1B4_1561	0.46	+0.0
1,800,418	+				+0.0
1,800,418	+				-2.7
1,800,418	+				+0.0
1,800,419	-				+0.0
1,800,419	-				-1.0
1,800,419	-				-1.4
1,800,419	-				-0.8
1,800,419	-				+0.0
1,800,419	-				+0.0
1,800,419	-				-3.2
1,800,419	-				+0.0
1,800,419	-				+0.0
1,800,419	-				+0.0
1,800,419	-				-2.7
1,800,421	+				+0.0
1,800,421	+				-1.5
1,800,422	-				+0.0
1,800,447	+				-1.4