Experiment: D-Glucose 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22180 and BWI76_RS22185 are separated by 80 nucleotides BWI76_RS22185 and BWI76_RS22190 are separated by 203 nucleotides BWI76_RS22190 and BWI76_RS22195 are separated by 57 nucleotides BWI76_RS22195 and BWI76_RS22200 are separated by 8 nucleotides
BWI76_RS22180: BWI76_RS22180 - recombinase RecA, at 4,626,034 to 4,627,092
_RS22180
BWI76_RS22185: BWI76_RS22185 - hypothetical protein, at 4,627,173 to 4,627,670
_RS22185
BWI76_RS22190: BWI76_RS22190 - hypothetical protein, at 4,627,874 to 4,628,066
_RS22190
BWI76_RS22195: BWI76_RS22195 - metal ABC transporter substrate-binding protein, at 4,628,124 to 4,629,002
_RS22195
BWI76_RS22200: BWI76_RS22200 - iron ABC transporter, at 4,629,011 to 4,629,874
_RS22200
Position (kb) 4627
4628
4629 Strain fitness (log2 ratio) -2
-1
0
1 at 4627.279 kb on - strand, within BWI76_RS22185 at 4627.346 kb on - strand, within BWI76_RS22185 at 4627.587 kb on - strand, within BWI76_RS22185 at 4627.894 kb on - strand, within BWI76_RS22190 at 4627.901 kb on - strand, within BWI76_RS22190 at 4627.949 kb on - strand, within BWI76_RS22190 at 4627.967 kb on - strand, within BWI76_RS22190 at 4628.001 kb on + strand, within BWI76_RS22190 at 4628.001 kb on + strand, within BWI76_RS22190 at 4628.002 kb on - strand, within BWI76_RS22190 at 4628.002 kb on - strand, within BWI76_RS22190 at 4628.002 kb on - strand, within BWI76_RS22190 at 4628.009 kb on - strand, within BWI76_RS22190 at 4628.150 kb on + strand at 4628.172 kb on + strand at 4628.223 kb on - strand, within BWI76_RS22195 at 4628.227 kb on + strand, within BWI76_RS22195 at 4628.235 kb on - strand, within BWI76_RS22195 at 4628.278 kb on - strand, within BWI76_RS22195 at 4628.301 kb on + strand, within BWI76_RS22195 at 4628.325 kb on - strand, within BWI76_RS22195 at 4628.432 kb on + strand, within BWI76_RS22195 at 4628.432 kb on + strand, within BWI76_RS22195 at 4628.440 kb on - strand, within BWI76_RS22195 at 4628.442 kb on + strand, within BWI76_RS22195 at 4628.458 kb on - strand, within BWI76_RS22195 at 4628.481 kb on - strand, within BWI76_RS22195 at 4628.529 kb on - strand, within BWI76_RS22195 at 4628.531 kb on + strand, within BWI76_RS22195 at 4628.620 kb on + strand, within BWI76_RS22195 at 4628.628 kb on - strand, within BWI76_RS22195 at 4628.633 kb on - strand, within BWI76_RS22195 at 4628.718 kb on - strand, within BWI76_RS22195 at 4628.733 kb on - strand, within BWI76_RS22195 at 4628.756 kb on + strand, within BWI76_RS22195 at 4628.813 kb on - strand, within BWI76_RS22195 at 4628.819 kb on + strand, within BWI76_RS22195 at 4628.819 kb on + strand, within BWI76_RS22195 at 4628.827 kb on - strand, within BWI76_RS22195 at 4628.827 kb on - strand, within BWI76_RS22195 at 4628.827 kb on - strand, within BWI76_RS22195 at 4628.901 kb on + strand, within BWI76_RS22195 at 4628.902 kb on - strand, within BWI76_RS22195
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 2 mM (C) remove 4,627,279 - BWI76_RS22185 0.21 -0.8 4,627,346 - BWI76_RS22185 0.35 +0.0 4,627,587 - BWI76_RS22185 0.83 +0.4 4,627,894 - BWI76_RS22190 0.10 -0.0 4,627,901 - BWI76_RS22190 0.14 +0.4 4,627,949 - BWI76_RS22190 0.39 -0.1 4,627,967 - BWI76_RS22190 0.48 -0.1 4,628,001 + BWI76_RS22190 0.66 +0.3 4,628,001 + BWI76_RS22190 0.66 -0.5 4,628,002 - BWI76_RS22190 0.66 +0.2 4,628,002 - BWI76_RS22190 0.66 -0.2 4,628,002 - BWI76_RS22190 0.66 +0.5 4,628,009 - BWI76_RS22190 0.70 -0.0 4,628,150 + -0.7 4,628,172 + +0.8 4,628,223 - BWI76_RS22195 0.11 +0.2 4,628,227 + BWI76_RS22195 0.12 +1.6 4,628,235 - BWI76_RS22195 0.13 +0.2 4,628,278 - BWI76_RS22195 0.18 -0.4 4,628,301 + BWI76_RS22195 0.20 +1.6 4,628,325 - BWI76_RS22195 0.23 +0.8 4,628,432 + BWI76_RS22195 0.35 +0.6 4,628,432 + BWI76_RS22195 0.35 -0.1 4,628,440 - BWI76_RS22195 0.36 +0.4 4,628,442 + BWI76_RS22195 0.36 +0.2 4,628,458 - BWI76_RS22195 0.38 +0.9 4,628,481 - BWI76_RS22195 0.41 -0.0 4,628,529 - BWI76_RS22195 0.46 +0.3 4,628,531 + BWI76_RS22195 0.46 +0.2 4,628,620 + BWI76_RS22195 0.56 +0.3 4,628,628 - BWI76_RS22195 0.57 +0.1 4,628,633 - BWI76_RS22195 0.58 -0.7 4,628,718 - BWI76_RS22195 0.68 -1.9 4,628,733 - BWI76_RS22195 0.69 +0.5 4,628,756 + BWI76_RS22195 0.72 -0.2 4,628,813 - BWI76_RS22195 0.78 -1.1 4,628,819 + BWI76_RS22195 0.79 -0.0 4,628,819 + BWI76_RS22195 0.79 +0.1 4,628,827 - BWI76_RS22195 0.80 -0.1 4,628,827 - BWI76_RS22195 0.80 +0.0 4,628,827 - BWI76_RS22195 0.80 +1.2 4,628,901 + BWI76_RS22195 0.88 -0.2 4,628,902 - BWI76_RS22195 0.89 -1.9
Or see this region's nucleotide sequence