Experiment: MoLS4 with L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1527 and tRNA-Ser are separated by 176 nucleotides tRNA-Ser and DVU1528 are separated by 342 nucleotides
DVU1527: DVU1527 - site-specific recombinase, phage integrase family (TIGR), at 1,594,709 to 1,595,902
DVU1527
DVU_tRNA-Ser-4: tRNA-Ser - tRNA with anticodon CGA for Ser (VIMSS-AUTO), at 1,596,079 to 1,596,173
tRNA-Ser
DVU1528: DVU1528 - cytidine/deoxycytidylate deaminase family protein (TIGR), at 1,596,516 to 1,597,001
DVU1528
Position (kb)
1596
1597 Strain fitness (log2 ratio)
-2
-1
0
1 at 1595.093 kb on - strand, within DVU1527 at 1595.130 kb on + strand, within DVU1527 at 1595.206 kb on - strand, within DVU1527 at 1595.233 kb on - strand, within DVU1527 at 1595.272 kb on - strand, within DVU1527 at 1595.403 kb on - strand, within DVU1527 at 1595.403 kb on - strand, within DVU1527 at 1595.531 kb on - strand, within DVU1527 at 1595.587 kb on + strand, within DVU1527 at 1595.818 kb on + strand at 1595.826 kb on - strand at 1595.883 kb on + strand at 1595.891 kb on - strand at 1595.925 kb on - strand at 1595.958 kb on + strand at 1596.343 kb on + strand at 1596.343 kb on + strand at 1596.358 kb on - strand at 1596.371 kb on - strand at 1596.378 kb on + strand at 1596.403 kb on - strand at 1596.405 kb on + strand at 1596.405 kb on + strand at 1596.499 kb on + strand at 1596.499 kb on + strand at 1596.507 kb on - strand at 1596.507 kb on - strand at 1596.523 kb on + strand at 1597.070 kb on - strand at 1597.151 kb on - strand at 1597.166 kb on + strand at 1597.166 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Arginine (N) remove 1,595,093 - DVU1527 0.32 +0.3 1,595,130 + DVU1527 0.35 +1.2 1,595,206 - DVU1527 0.42 +0.0 1,595,233 - DVU1527 0.44 -1.0 1,595,272 - DVU1527 0.47 +0.4 1,595,403 - DVU1527 0.58 -0.2 1,595,403 - DVU1527 0.58 +0.5 1,595,531 - DVU1527 0.69 +0.1 1,595,587 + DVU1527 0.74 -1.1 1,595,818 + -0.2 1,595,826 - -0.3 1,595,883 + -0.3 1,595,891 - -0.1 1,595,925 - +0.5 1,595,958 + -0.3 1,596,343 + -0.7 1,596,343 + -0.2 1,596,358 - -0.1 1,596,371 - -0.6 1,596,378 + +0.3 1,596,403 - -0.3 1,596,405 + -0.8 1,596,405 + -0.2 1,596,499 + +0.3 1,596,499 + +0.1 1,596,507 - +0.2 1,596,507 - -0.3 1,596,523 + -0.4 1,597,070 - -1.8 1,597,151 - -0.9 1,597,166 + +0.4 1,597,166 + +0.0
Or see this region's nucleotide sequence